Caldibacillus thermoamylovorans: CQJ30_03115
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Entry
CQJ30_03115 CDS
T06263
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQJ30_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthv03019
]
CQJ30_03115
03009 Ribosome biogenesis [BR:
bthv03009
]
CQJ30_03115
Enzymes [BR:
bthv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CQJ30_03115
Messenger RNA biogenesis [BR:
bthv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQJ30_03115
Ribosome biogenesis [BR:
bthv03009
]
Prokaryotic type
rRNA helicases
CQJ30_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWI11267
UniProt:
A0A0D0FK09
LinkDB
All DBs
Position
625586..627007
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AA seq
473 aa
AA seq
DB search
MGKFENLNLSSTTLKSLKRIGFEETTPIQEQTIPLSMQGKDIIGQAQTGTGKTAAFGIPL
IEKINTRNKNIQSLVIAPTRELAIQVSEELFKLGYEKHVQVLSVFGGQDISRQIRALKKK
PAIIVGTPGRLLDHIHRKTIKLQDIHTVVLDEADEMLNMGFIEDIEKILESVPEERQTLL
FSATMPERIRQIAIKFMKDPETVRIKAKEMTVPQIDQFFVKVEEKDKFDALTRLLDYQSP
DLAIVFGRTKRRVDEVSEALSIRGYTAEGIHGDLSQAKRLSVLRKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAITFVAPREMGYLRTVEETTK
RRMKRMQVPSIAEAIEGQQRLTIDKIHNTIDENDLSLYRKAAEELLTQHDALTIVSAALK
LLTKEPATTPVKISYEAPLPVKRDKNNFSKKVGRGSREMPRRQRSHNRSYKKS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgggaaaatttgaaaatttaaatttaagttctactacattaaagtcactgaagcgaatt
ggttttgaggaaacgacgccgattcaggaacaaacaattccgttaagcatgcaaggaaaa
gatatcattggacaagcgcaaacaggtacggggaaaacggccgcctttggaatccctttg
attgaaaaaatcaataccagaaataaaaatatccaaagtttagtcattgccccaacccga
gaattggctattcaagtttcagaagaattgtttaaacttggttatgaaaagcatgtccaa
gtattgtcagttttcggtggtcaagatatttcaagacaaattcgtgccttaaagaagaaa
ccggctattattgtcggtacacccggaagactgctggatcatattcaccggaaaaccatt
aagcttcaagatattcatacggttgtcctcgatgaagctgatgaaatgttgaatatggga
tttattgaagatattgagaaaattttagaaagtgttcctgaagaaaggcaaacattatta
ttttcggcaactatgcctgagcgaattcgtcagattgctattaagtttatgaaagatccg
gaaacagttcggattaaagcaaaagaaatgacggttccacaaattgatcaattttttgtt
aaagtggaggaaaaagacaaatttgacgcgttaactcggttgcttgattaccaatcaccg
gatttggcgatcgtttttggcaggacaaaacgacgtgtcgatgaagtgtcagaagccctt
tccatcagaggttatacggcagaaggcattcatggcgacttatcgcaagcaaaacgtctt
tccgttcttcgtaaatttaaagaaggatcgattgatgttttggttgccaccgatgttgct
gcacgcgggttggatatttcaggtgttactcatgtatataattttgatatcccgcaagat
ccagaaagctatgttcaccgaatcggacggactggtcgtgccggaaagactgggatggca
atcacttttgtagcaccgcgtgaaatgggatatttacggacagtggaagaaaccacgaaa
agacggatgaaacggatgcaggtcccgtccattgcagaagcgattgaaggtcaacaacgt
ttaaccattgataagattcataatacgatcgatgagaatgacctttccctttaccggaaa
gcagctgaagaattattgacgcagcatgacgcacttacgattgtatcggccgctctcaaa
ttattaacaaaagaacctgctacaacgccggtgaaaatttcctatgaagctccgttaccg
gtaaaacgagacaaaaataatttttctaaaaaagtaggcagaggttcaagagaaatgccg
agaagacaacggtcacataatcgcagctataaaaaaagctag
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