Caldibacillus thermoamylovorans: CQJ30_08480
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Entry
CQJ30_08480 CDS
T06263
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bthv
Caldibacillus thermoamylovorans
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bthv03016
]
CQJ30_08480
Enzymes [BR:
bthv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CQJ30_08480
Transfer RNA biogenesis [BR:
bthv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CQJ30_08480
Prokaryotic type
CQJ30_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWI12193
LinkDB
All DBs
Position
1737518..1738429
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AA seq
303 aa
AA seq
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MNGVIPLWKPKGMTSHDCVIKIRKLLSTKKVGHSGTLDPNVTGVLPICVGEATKIVQYVT
NFGKCYQAEITIGISTTTEDSDGEIVQTKPVKQPITRDEILKALKQLTGEITQIPPMYSA
VKVNGKRLYEYAREGIEIERPERTVTIYELELLDDNEIFTGEFIRFSVRVKCSKGTYIRT
LAVMIGEMLGYPAHMSKLVRTSAGGIGQEQCLTFEQIEEKITKGLTNEIFLPIESVLFQL
PKYEIHDTLANRVKNGALIPIPDHLLYTLGPIAVYYKGKILAIYKHHPTKQGILKPDRVF
VGN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgttattccgttatggaaaccaaaaggcatgacctcacatgattgtgtaata
aaaatcaggaaattattaagtacaaaaaaagttggacatagtggtacgctcgatccaaat
gtgaccggtgtactgccaatatgtgtaggagaagcaacaaaaattgttcaatatgtaaca
aattttggaaaatgttatcaagcagaaataacgattgggatctcaacaacgacagaagac
agtgacggagaaatcgtacaaacgaagcccgtcaaacagccaattacaagagatgaaatt
ttgaaagctttaaaacaacttaccggggagattacccaaataccaccgatgtattcagca
gtaaaagtcaatgggaaaagattatatgaatatgctcgggaaggaatagagatagaaaga
cctgaacggactgttaccatctatgaattggagctgctggatgacaacgaaatatttacc
ggggaattcatccgtttttccgttcgtgtaaaatgcagtaaaggaacgtatatacgtact
ttggctgtgatgatcggggaaatgttaggttatcctgcccatatgtcaaaacttgttcgc
acatcagccggtggaataggacaggagcaatgtttaacatttgaacaaattgaagagaaa
attaccaaaggattaacgaacgaaatctttttaccgattgaatctgttttgtttcaattg
ccgaaatatgaaattcatgatacattagctaatagagtaaaaaatggtgcacttattcct
atacctgatcatttactttatacccttggtcctattgctgtttattacaagggaaaaata
ttagccatttataaacaccatccaactaagcaagggatcttgaagcctgatcgtgttttc
gtagggaattga
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