Caldibacillus thermoamylovorans: CQJ30_12340
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Entry
CQJ30_12340 CDS
T06263
Name
(GenBank) ATP-dependent helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bthv
Caldibacillus thermoamylovorans
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthv03019
]
CQJ30_12340
03009 Ribosome biogenesis [BR:
bthv03009
]
CQJ30_12340
Enzymes [BR:
bthv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CQJ30_12340
Messenger RNA biogenesis [BR:
bthv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQJ30_12340
Ribosome biogenesis [BR:
bthv03009
]
Prokaryotic type
rRNA helicases
CQJ30_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWI12873
UniProt:
A0A0D0EMJ1
LinkDB
All DBs
Position
complement(2502387..2503706)
Genome browser
AA seq
439 aa
AA seq
DB search
MEKTNFTRFSLKPFLYEGLENMGFYDPTDIQERVIPKALKGLSLVGQSQTGTGKTHAFLL
PILTKLNPSIQSVQAVITAPTRELAHQIYHEVLKLTKYCPKDEEITAKLFVGGTDKARVI
EKLKVQPHIVIGTPGRIYDLVKEQALFVHTATMMVVDEADLMLDLGFLEDVDRIAGAMPE
QLQMFVFSATIPENLKPFLKKYMENPEFVHVEPKQRTAKNIEHILLPLRHRDKFHFLKNL
MEIIHPYLAIIFVNTKARADELANLLAENGVKVGLIHGNLTPRERKKMMSQIRNLEYQYI
VATDLASRGIDIEGVSHVFHYELPKDLNFYIHRSGRTGRGAYSGVSYILFDEQDNEKISK
LENMGITFTYMDIVAGELKEIEDRNQRKNRKRKPQEVDIQVKRAIKKPKKVKPGYKKKQK
ELLEKEKKRQLKKLGRPRH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacgaattttacaaggttttcattaaaaccgtttttatatgaaggactggaa
aacatgggtttttacgatccaaccgatattcaagaacgggtgattcctaaagcgttaaaa
ggtctgtccttggttggccaatcccaaaccggaaccgggaaaacacatgcatttctcttg
ccgatactgacaaaactgaatccgtcaattcaatcggtccaagccgtgattaccgcacca
acccgggaattggctcaccaaatatatcacgaggtcttgaaattaacaaaatattgcccg
aaagacgaagaaattacagcaaaattatttgttggcgggacagataaagcccgggtaatt
gaaaaattgaaagtacaaccgcatatcgttatcggtacaccagggcgaatttatgacttg
gtgaaagaacaggcattattcgttcataccgcaactatgatggttgtcgatgaagctgat
ttaatgttggatctcggctttttagaagatgtggaccggattgcaggagcgatgcctgaa
cagttacaaatgtttgtcttttcggcaacgattccggaaaacttaaaaccttttctgaaa
aaatatatggaaaatcctgagtttgttcatgttgaaccgaaacagagaactgcgaaaaat
attgaacatattttgcttcctttgcgacaccgtgacaaattccattttctaaaaaatttg
atggagatcattcatccgtatttagccattatttttgtaaatacgaaagccagagctgat
gaacttgctaatctattggccgaaaacggtgtgaaagtcggtttgattcatggaaatctc
accccaagggaacgaaaaaagatgatgtcgcaaatccgtaatttggagtatcagtatatt
gttgcgaccgatttggcatcacgggggattgatattgaaggggtcagccacgttttccat
tacgagttacctaaggacttgaatttttatattcatcgttcgggacggaccggtcgggga
gcgtactcgggtgtgtcatatatcctttttgatgagcaggataacgaaaaaattagtaaa
ttggaaaacatgggtattaccttcacttatatggatatagtggcgggagagttgaaagaa
attgaagaccggaatcagcgaaaaaatcggaaaagaaaaccgcaggaagtagatatccaa
gtaaaacgggcgataaaaaaaccgaaaaaagtaaaaccgggttacaagaagaaacagaaa
gagttactcgaaaaagagaaaaaaagacaattaaagaaactcgggcgaccgcgtcattag
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