Caldibacillus thermoamylovorans: CQJ30_12735
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Entry
CQJ30_12735 CDS
T06263
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CQJ30_12735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_12735
Enzymes [BR:
bthv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CQJ30_12735
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CQJ30_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
AAA_16
AAA_12
nSTAND3
AAA_28
T2SSE
HHH_5
AAA
NPHP3_N
NTPase_1
AAA_5
UvrD_C
TsaE
AAA_17
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWI12945
LinkDB
All DBs
Position
complement(2581933..2584329)
Genome browser
AA seq
798 aa
AA seq
DB search
MQQEERYIKGRPIVTIFHNEQNLYTVLRIRVDESNEAGVNKDAVVTGYFPRLYEEETYIF
YGKFTDHPKYGPQFQVDHFRKDLPKTKQGVVQYLSSELFKGIGKKTAENIVDVLGENAIE
RIMKQPSLLDTVPKLAADKAKLLHEKLIEYQGLENIMVGLNQYGFGPQLSMRIYQTYKEH
TLEIVENNPYKLVEDIEGIGFGRADELGFKLGMKGNHPDRVKAGCLYTLETDCIQEGHCY
LEKKTFIPAVKKLLESNQPVEIFPEEIEHELLKLEEEGKIVIDEERVFLPSIFYSEKGLV
TNIKRILAQKEFEDGFPESEFLLALGSLEERLGIQYAPSQREAIQTALSSPMLILTGGPG
TGKTTVIKGIVELYGELHGCSLDPKDYKKDEVFPFVLAAPTGRAAKRMAESTGLPAVTIH
RLLGWNGTETFDYNEDNPIEGKIVIIDEMSMVDIWLAHHLFKALPAHVQVILVGDEDQLP
SVGPGQVLKDLLASERIPTVRLTDIYRQESGSSIIQLAHAIKNGTIPEDLRKQQKDRSFI
SCRTTQVADVVKQVVGHAINKGYTPKDIQVLAPMYRGPAGIDELNILLQEILNGTNKEKR
RELNFGDHTYRVGDKVLQLINQPDKNIFNGDIGEIVAIFYAKETEEKVDQLVVSFDGNEV
TYPRQDLHQITLAYCCSIHKSQGSEFPIVILPIVRGYHRMLRRNLIYTAITRSKEKLILC
GEEDAFRTAVYRTDDNIRNTTLKKRLLQEINGNHTPDIGVVKEDMSYEERLMNTDPMVGM
ENISPYDFMIEDRAEYLS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagaagaacgttatattaaagggcgaccgatcgtcacaatttttcacaatgaa
caaaatttatataccgttcttcggattcgtgtcgatgaatcaaatgaggctggtgtgaac
aaagatgcggttgtcaccggttatttcccccgtctgtatgaagaggaaacatatattttt
tacggaaagtttacggatcatccaaaatacggtccacaatttcaagtggaccattttcga
aaagatctgccaaagacaaaacaaggtgttgttcaatatttatcaagtgaactttttaaa
ggaattggaaagaaaacggccgaaaatattgtggacgtgctgggtgaaaatgctatcgaa
cgcattatgaaacagccgtctttattggacacggtaccgaaattggctgctgataaagca
aaattgttacatgaaaaattaatagagtatcaagggttagaaaatattatggtcgggttg
aatcaatacggattcggtccacagctgtctatgcgaatctatcaaacatataaagaacat
acactggaaatcgtcgaaaataacccgtataaacttgtggaagatattgaaggaattggc
tttggtcgggcagatgaattaggctttaaactcggcatgaaaggaaatcatccggatcgg
gttaaggccggttgtttatacacattagaaacagattgtattcaagaaggtcattgttat
ttggaaaagaaaactttcattccggctgttaaaaagttgctggaatctaaccagccggtg
gaaatttttccggaagaaattgagcatgaacttttgaaactggaggaagaaggaaagatc
gtcatcgatgaggaacgtgtatttctaccttccattttttattcggaaaaaggtttggta
acgaatataaaaagaatcttggctcaaaaagaatttgaagacggctttccggaatcagaa
tttctacttgcattaggtagtttagaggaacggcttggtattcaatatgctccatcacaa
agggaagcaattcaaaccgcactctccagtccaatgttaattttaaccggcggaccggga
acgggaaaaacgacggtaattaaaggaatcgttgaactgtatggagaattgcacggttgc
agtttggatccaaaagactataaaaaggatgaagtgtttccgtttgtgttggctgctcca
accggtcgagccgcaaaacggatggcggaatcaaccggtttaccggcagtaacgattcat
cgattactcggctggaatggaaccgaaacctttgattataacgaagataatccgattgaa
gggaagattgttatcattgatgagatgtctatggttgacatttggcttgcccatcattta
tttaaagctttgcctgcgcatgtgcaagttattttggtcggtgatgaagatcaattacct
tccgttggcccggggcaagttttgaaagatttattagcctcagaacgaattccgaccgtt
cgtttgacggatatttatcgacaagaaagcggctcatccattattcagcttgctcatgcc
ataaaaaacgggacgataccggaagatttaagaaagcaacaaaaggatcgttcattcatt
tcttgccgtacgacacaagttgctgatgtcgtaaagcaggtcgtcggacatgcaattaat
aaaggttatacacctaaagatattcaagttttggcaccgatgtatcgggggccggccgga
attgatgaactgaatatacttctccaagaaatattgaatggaacgaacaaggaaaagcga
agggaattaaactttggcgaccatacttaccgggttggcgataaagttttgcaattaatc
aatcaaccggataaaaatatttttaacggtgatatcggtgaaattgtagctatcttttat
gcaaaagagacagaagaaaaagttgatcaactggtcgtttcgtttgacggcaatgaagtt
acttacccgagacaggatttacatcaaattacccttgcctattgctgcagtattcacaaa
tcgcaagggagcgaatttccgattgtcattctaccgattgtcagaggctatcaccggatg
ttacggagaaatcttatttatacggccatcacgcggagtaaagaaaaattaattttatgc
ggggaagaggatgcctttcgaaccgctgtttatcgtacggatgataatataaggaacacg
acgttaaagaaacgattattgcaagaaataaacggaaatcacactccggatatcggggta
gtgaaagaagatatgtcttatgaagaacgattaatgaatacggatccgatggttggcatg
gagaatattagcccgtatgatttcatgattgaagatagagcggaatatttaagttga
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