Caldibacillus thermoamylovorans: CQJ30_12805
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Entry
CQJ30_12805 CDS
T06263
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03410
Base excision repair
bthv03430
Mismatch repair
bthv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CQJ30_12805 (recJ)
03430 Mismatch repair
CQJ30_12805 (recJ)
03440 Homologous recombination
CQJ30_12805 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_12805 (recJ)
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CQJ30_12805 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CQJ30_12805 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CQJ30_12805 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AWI12956
LinkDB
All DBs
Position
complement(2600725..2603085)
Genome browser
AA seq
786 aa
AA seq
DB search
MLQAKTRWAVREGNRQKAEQLMNELQLTPLVANLLVNRGLDTAESVKKFLNPDEEFHHPF
LLNDMDICVERIFRAIRNRERMVVYGDYDADGVTSTYVLLKTLRELGADADFYIPNRFTE
GYGPNEKAFRTLKEAGYHLIITVDNGIAGIHEAKVAKEIGIDLIITDHHEPGPELPDCLA
IIHPKRADSNYPFKDLAGVGVAFKLVTALLGKVPEELLPFAAIGTIADLVPLKDENRLIV
KKALPLLQSSDHFGLKALMRVAGINQQELNEESISFGLAPRINAPGRLYHAGMVVDLFLA
NDKDEAEQLAHEINEINKERQEIVDKITVEAIEEISQSSNYIDDQVIVVGKEGWHAGVIG
IVASRLVEKFYRPVIVFSFDQATGLAKGSARSIPKFNMYQNLFQCKELLPHFGGHPMAAG
LTMKISDVPELRERLNRLASEQLDEEDFIPVTEVDGMIPLEDIHLQSVKELLQFAPFGTE
NPKPLLLINDIQLPQIKKVGADKNHLKAIIENHSAQLDCIGFHMGDLADEISPLSKASVI
GELAINEWNHVSKPQFILKDICIDEWQLFDYRGNRRIDQWIHQVPEKSSKLIVFRESTVN
QMNLSEFAAGLEIIHSEASAKNCDIDGMNIVLIDLPQSKKQLESLLAGKQVARIYAHFYQ
DDIELLNTMPTREHFKWMYAFLCKKGVFDFRRYGAELAKYKGWSLHTIKFMLTVFFELNF
VTMDNGILSVIKNPSKRDLSESKTYQLRQEIIQLEKELLFSSYKQLKNSLDRFIGTANMK
EAKAWI
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagcaaagacgcgttgggcggttcgagaaggaaatcgtcaaaaagcggaacaa
ttaatgaatgaactgcagttgacacctctagtagcaaatttattagtcaatcgaggttta
gatacggctgaaagtgtaaagaaatttttaaatccggatgaagagtttcaccatcctttt
ttgcttaatgatatggatatatgtgttgaacgaatttttcgggcaattcgaaatcgtgag
cgaatggtcgtgtatggcgactatgatgccgatggagtaacaagtacttatgtattattg
aaaacattacgtgaactcggtgcggatgccgatttttatataccaaatcgcttcacggaa
ggatacggcccaaatgaaaaagcatttcgaacactgaaagaagccggttatcatttaatt
atcacggttgataacggaattgccgggattcatgaagcaaaagtggcaaaagaaattggt
attgatttaatcatcaccgatcatcacgaacccggaccggaactcccggattgtttggcg
attattcatccgaagagggctgattccaattacccgtttaaagatttagccggtgtcggt
gtcgcgtttaaattggtgacagctcttttagggaaagttccggaagaattgcttccgttt
gcagcaatcggaactatagctgatttagtacctctcaaagatgaaaatcgcttgattgta
aaaaaagcattacctctcttacaatcgtcagatcattttggtttaaaggcgttaatgcgg
gttgccgggatcaatcagcaagaattaaatgaagaatcaattagttttggactagccccg
cggataaacgctcccggaagattataccatgccggtatggtcgttgatttatttttggca
aatgataaagatgaggctgaacaattggcccatgaaattaatgaaatcaataaagaaaga
caagaaatcgtcgataaaataactgttgaagcgattgaggaaatttctcaatcatcaaat
tacatagacgatcaggtcattgtggtcggtaaggaaggctggcatgcaggggtcattggc
attgttgcttccagattagtggaaaaattttatcggccagttattgttttttcttttgat
caagcaaccggattggctaagggttcggcaagaagtattccaaaatttaatatgtatcaa
aatttgttccaatgtaaagaacttttgccgcattttggcggacacccgatggctgccggg
ctgactatgaaaatctcagatgttccggaattaagggaacggttgaaccggttggcaagt
gaacaattagatgaagaggattttatcccggttactgaagtcgatgggatgattccattg
gaggatatccatttgcaatctgttaaggaattgcttcagtttgccccgtttggaacagaa
aatccaaaaccattgcttttaataaatgatattcaattgccacaaatcaaaaaagtcggt
gcagataaaaatcatctgaaagcaatcattgaaaaccattcggctcaacttgattgtatc
ggttttcatatgggggatcttgccgatgaaatatcaccattatcgaaagcttcggtcatt
ggagagttagcgattaatgaatggaatcatgtcagtaaaccgcagttcatattaaaagat
atttgtattgatgaatggcaattgtttgattatcgcggtaaccgaagaatcgaccagtgg
attcatcaagtgccggaaaaaagcagtaaactgattgtttttcgcgaatccaccgtcaac
caaatgaatttatccgagttcgctgccggtcttgaaatcatccattctgaagcttcagcg
aaaaattgtgatatcgacggaatgaacattgttctaattgatttaccccaatcaaaaaaa
caattagagtcattattggctggaaagcaggttgcaagaatttatgcccatttttatcaa
gacgatatcgaactcttaaatacgatgccgacaagagaacattttaaatggatgtatgca
ttcttgtgtaaaaaaggtgtgtttgatttccggcgttatggagccgaattggcgaaatat
aaaggatggtcacttcataccataaaatttatgctaacggtgttttttgaactgaatttt
gttacaatggataatggtattctttcagttataaaaaatccgtcaaaacgagatttatca
gaatcgaaaacttaccaattaagacaggaaattattcaattggaaaaagagttgctcttt
tcatcctataaacaattaaaaaatagtctcgatagatttatcggtaccgcaaatatgaag
gaggcaaaggcatggatttag
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