Caldibacillus thermoamylovorans: CQJ30_13495
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Entry
CQJ30_13495 CDS
T06263
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03030
DNA replication
bthv03410
Base excision repair
bthv03420
Nucleotide excision repair
bthv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CQJ30_13495
03410 Base excision repair
CQJ30_13495
03420 Nucleotide excision repair
CQJ30_13495
03440 Homologous recombination
CQJ30_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthv03032
]
CQJ30_13495
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_13495
Enzymes [BR:
bthv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CQJ30_13495
DNA replication proteins [BR:
bthv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CQJ30_13495
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CQJ30_13495
NER (nucleotide excision repair)
GGR (global genome repair) factors
CQJ30_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
ArgoN
HHH
Motif
Other DBs
NCBI-ProteinID:
AWI13083
LinkDB
All DBs
Position
complement(2757894..2760587)
Genome browser
AA seq
897 aa
AA seq
DB search
MIRSRIQSTILASVKRNGGYILNKKVVLIDGNSVAYRAFFALPLLNNEKGIHTNAVYGFA
MMLEKILKEEKPTHILVAFDAGKTTFRHETFSDYKGGRQKTPPELSEQFPYLRELLKAHG
IAQYELENYEADDIIGTLSKQAEENNFEVRIVSGDKDLTQLASEKTTVLVTRKGVTDIEK
YTPGHIKEKYGLSPEQIIDMKGLMGDASDNIPGVPGIGEKTAIKLLKQYHSVENLLESVD
QVSGKKLQENLSTYKDQALMSKQLATIFRDAPIDIGLADINYQGANTEKLVSLYKELGFQ
SFLEKMDSSVQIEDQKLEEVEFEFVKEITEEILQQNSALYVEIIEDNYHYAPIIGLGLVN
DTGNYYLPVDVVKSSSVFKAWLEDEKTKLAVYDAKRTIVSLQKLGMDVNGIDFDLLIASY
LLNPSETIQDFSDVAKAHHYNQVLADDTVYGKGAKRTSLTDKERAETIVRKALAIYHLKD
RLIDELKKNEQYELFIELEMPLSRILAEMESTGVAVDVNRLKEMGEEIKKRLNEIEGKIH
QLAGEPFNINSPKQLGVILFDKLGLPVIKKTKTGYSTSADVLEKLQTEHEIVDQILTYRQ
LGKLQSTYIEGLLKVVNPEDGKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQA
FVPSEKGWVMFSADYSQIELRVLAHISGDERLIDAFKQGLDIHTKTAMDVFHVAHDEVTS
NMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGQFIERYFKSYPQVKQYMEDIVQEAKQ
NGYVTTLLHRRRYIPEITSRNFNVRSFAERTAMNTPIQGSAADIIKKAMIDMAERLKTEK
LQARLLLQVHDELIFEAPEDEVEKLKEIVPDVMEHALELKVPLKVDYAYGPTWFDAK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgataagaagccgaatacaatctacaatattagcgagtgtcaaaagaaacgggggttat
attttgaataagaaagtagttttaattgacggaaatagtgtcgcataccgtgcgttcttc
gccttgccgctattgaataatgaaaagggtatacatacaaatgctgtttacggatttgcc
atgatgcttgaaaaaattttaaaggaagaaaaaccaacacatatattagtcgcttttgat
gcaggaaaaacgacttttcgacatgaaacttttagtgattataaaggtggtcgacaaaaa
acaccccctgaattatccgaacaatttccatatcttcgtgaattattaaaagcacacgga
attgctcaatacgaactggaaaattatgaagccgatgatattatcggaacattatcgaaa
caagctgaagaaaacaattttgaagtacgaatcgtttccggtgataaagacttaacccag
ctggcttctgaaaaaacaacggtcttagttacccgtaaaggtgttaccgatattgaaaaa
tatacacctggccatataaaagaaaagtatggcttaagtccggaacaaattattgatatg
aaaggtttgatgggggatgcaagcgacaatattcccggcgttccgggtattggggaaaaa
acggctatcaaactgttaaaacaatatcattcggttgaaaatttattagagtcggttgac
caagtaagcgggaaaaaattgcaagaaaacttatcgacttacaaagatcaggcattaatg
agtaagcaattagcgacgatttttcgtgatgcgccgattgatatcggattagctgacatt
aattatcaaggtgcaaacacagaaaagcttgtttcactatataaagaactcggcttccaa
tcttttcttgaaaaaatggattcgtctgttcagattgaagatcagaaattggaagaagtc
gaattcgaatttgtaaaagaaattaccgaggaaatattacaacaaaatagtgcgctatat
gtagaaatcattgaagataattaccattatgctccaatcatcgggctggggctggtcaat
gatacaggaaattactatcttccggttgatgtcgtaaaatcttcttcggtttttaaagca
tggcttgaagatgaaaaaacgaaacttgccgtatatgatgcgaaacgaacgattgtttca
ttacaaaaacttggtatggacgtaaacggaattgactttgatttactaatcgcctcttac
ttattaaatccgtccgagacaatccaagattttagtgatgtcgcaaaagcccatcattac
aaccaagtattagcagatgatacagtttatgggaaaggggcaaaacggacatcattaacg
gataaagaacgggctgaaaccatcgttcgaaaagccttggccatttaccatttaaaagat
cgcttgattgatgaactgaagaaaaatgaacaatacgagctatttatcgaactagaaatg
ccgctgtcgagaattttagcggaaatggaaagcaccggagtagcagttgatgtaaaccgt
ttgaaagaaatgggagaagaaattaaaaaacggttaaatgagattgaaggaaaaattcac
caattggccggtgaaccattcaatatcaattccccgaaacaactcggtgtcattttattt
gataaactaggtttaccggtcattaaaaagacaaaaaccggctattcaacgtcagcggat
gtattggaaaaattgcaaacggaacatgagattgttgatcaaattttaacatatcgccaa
cttggtaaattacaatcgacatatattgaaggcttattgaaagtcgttaatccggaagac
ggaaaagtccatactcgttttaatcaagcgttaacccaaaccgggcggctcagctcgacc
gatccgaatttacaaaatatcccgattcgtttagaagaaggacgaaaaatcaggcaagca
tttgtcccatcggaaaaaggttgggtgatgttttcggcggattactcgcaaattgagtta
cgggtacttgctcatatttcgggagatgaacgattgatcgatgcctttaaacaaggcctt
gatattcatacaaaaacagcaatggatgtctttcatgttgctcatgatgaagtgacaagt
aatatgcgaagacaggcaaaagcagtcaatttcggtatcgtttacggcatcagtgattat
ggtttgtcgcaaaacttagggattacaaggaaagaagccggtcaatttattgaacgctat
tttaaaagttatccgcaagttaaacagtatatggaagatatcgtccaagaagcaaaacaa
aatggatatgtcaccacattattacaccggagacgttatattcctgaaatcacgagccgg
aatttcaatgtgcgcagttttgccgagcggacagccatgaatacaccgattcaagggagt
gccgctgatatcattaaaaaagcaatgatcgatatggccgagagattaaagacggaaaaa
ttacaagcacgcctccttttacaagttcatgatgaacttatctttgaagcgccggaagat
gaagtggaaaaattaaaggaaattgttccggacgttatggagcatgcgcttgaacttaaa
gtgccattgaaagttgattatgcttacggtccgacatggtttgatgcgaagtaa
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integrated database retrieval system
