Caldibacillus thermoamylovorans: CQJ30_18865
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Entry
CQJ30_18865 CDS
T06263
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bthv
Caldibacillus thermoamylovorans
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bthv03009
]
CQJ30_18865
Enzymes [BR:
bthv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CQJ30_18865
Ribosome biogenesis [BR:
bthv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CQJ30_18865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Ubie_methyltran
Methyltransf_4
Methyltransf_11
RrnaAD
Methyltransf_23
PCMT
Cons_hypoth95
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AWI14036
LinkDB
All DBs
Position
3966076..3967464
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AA seq
462 aa
AA seq
DB search
MSTTVGSSFITEIRQLDKNGAGQAVVWHENEKGKSKKLKLTVPETLPGEKVRVTVDKPER
RRRKAVLEEIIEAHPERIGPACPHFSLCGGCVWQHWQYAGQLQEKTNHVKHALEAQGFEP
YLVQDTMGMEDPWHYRNKMEFTFSPDGTLGLHEQGNFRKIISLETCLIAGKKMVEAAMDI
AKWASDHHLSGYNKDTHEGLLRHLMVRESFATGEMMLALFATEAPDGNLREAASDLIDRI
EAKFPEVKSLLWLENRDWADRTQSEKTHVLSGRDFIYDELSGFRYRIWYDTFFQTNPTQA
QKLVDLAIEMGQPKKNEKMIDLFCGVGTFSLPFAKQVKELSGIEIVETSIESAKRNAKDN
GITNTHFLARDARHGIDEVIDSFGTPELLLLDPPRSGAGGKVMRKIGRAQPERIVYVSCN
PDTFATDMKELRPFGYQLQLVQPVDLFPHTVHVECVALLTKA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgtctactactgtaggatcatctttcataaccgaaatcagacaattggataaaaatgga
gccggacaagctgtcgtttggcatgagaatgaaaagggaaaatcaaaaaaactcaaattg
actgtcccggaaacactgcccggagaaaaagtacgcgttactgttgataaacctgaacgg
agaaggagaaaagccgttcttgaagaaattattgaagctcatccggaacgaattgggcca
gcctgccctcatttctctttatgtggcggttgcgtctggcagcattggcaatatgccgga
caattgcaagaaaaaacgaatcacgtaaaacatgccttggaagcacaaggctttgaacca
tatcttgtccaagatacaatgggtatggaagatccgtggcattaccgtaataagatggaa
tttaccttctccccggatggcacgcttggtttgcatgagcaagggaatttcagaaaaatt
atttcacttgaaacttgcctaattgccggaaagaaaatggttgaagcggcaatggacata
gcaaagtgggctagtgatcatcatttatccgggtataataaagatactcatgaagggtta
ctgcgacacttaatggttcgtgaatcttttgccacaggggaaatgatgctggctttattt
gccaccgaggcgccggacggaaatcttcgtgaagctgcatccgatttaattgatcggatt
gaagctaaatttcccgaagtaaaaagtttattatggctggaaaatcgagattgggctgat
cggacccaatcagaaaaaacccatgttttatccggaagagattttatttatgatgaatta
tccggttttcgataccgtatttggtatgatacattttttcaaacaaacccgactcaagca
caaaaattagtcgatctggccattgaaatgggacagcctaaaaaaaatgaaaagatgatc
gatctcttttgcggtgtaggcacattttcccttccttttgctaaacaagtaaaagaatta
agcggcattgaaatcgtggaaacatccattgaatcagcaaagcgaaatgcaaaagataac
ggaataaccaacactcattttctggcgagagatgcacgtcatggcatagacgaggttatc
gatagctttggaacacccgaactattattattagaccctcctcgctcgggtgccggcggg
aaagtcatgcggaaaatcggtcgtgcgcaacctgaacgcattgtctatgtttcatgtaat
ccggacacatttgccactgacatgaaagaattacgcccattcggttaccaattacagctg
gttcaaccggtcgatcttttcccacatacagtacatgtggagtgcgttgcgttgttgacg
aaggcgtaa
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