Caldibacillus thermoamylovorans: CQJ30_19000
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Entry
CQJ30_19000 CDS
T06263
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bthv
Caldibacillus thermoamylovorans
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bthv03000
]
CQJ30_19000
Transcription factors [BR:
bthv03000
]
Prokaryotic type
Helix-turn-helix
Other families
CQJ30_19000
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_2
Mg_chelatase
AAA_5
AAA
HTH_50
HTH_30
AAA_3
nSTAND6
HTH_7
AAA_16
AAA_19
HTH_22
Mga
Motif
Other DBs
NCBI-ProteinID:
AWI14062
UniProt:
A0A090J3S1
LinkDB
All DBs
Position
complement(3997969..3999765)
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AA seq
598 aa
AA seq
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MSCMEMQQIWEKYVLENSLDSFIIDKTIIDSWQLSKKFKVNPKDGIGKRFLTTSDFQKRL
RDHETMVSLAKKSLNRFQFLLKNIDFILVLTDADGYILWQSGNEHLKEHAREIRFSQGYQ
WTESMVGTNSIGIALRTKEANFIHGYEHFARASHNWSCVASPVFGENREVVGVVDLSMPA
HYPKKEDFLFTVQLIAEFISEALQRKVFEEQKYMLQYFSSKKQPGILCNSSMTILHISPE
LVDEPEAYIGKKLSALPNEKWEIVKRDPIRKEDTCIGYFVYVKHRIFNHPFKFHYVSGRS
KTFHQLLEEVQIVAPTSAPIHLYGETGSGKEVLAKTIHENSPFAEGKLVSVNCGSIPENL
MESELFGYEKGAFTGANPNGYIGKIEQANNGTLFLDEIEDMPVSMQSDLLRVLQEKKLTR
IGGTKEINVNFRLITASNQDLKALVKAKKFRTDLFYRIYVCPLQIPPLRDRKEDIRELIK
YFESANSWYPFWEEMLVEVAEQYPWKGNVRELNNFLERCLIYYRDRIPTKEQLIQLIQKG
GLIEFQETSDTLSFKEQIEKENIYNALVNNNGNIPMAAKQLSISKSTLYRKIKKYKLD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtatggaaatgcagcaaatttgggagaaatatgtccttgaaaattcactcgat
tcatttataattgataaaacaattatcgattcttggcaacttagtaaaaaattcaaagtc
aatcctaaagatggaattggcaaacgatttcttacgacgagcgattttcaaaaaagattg
agagatcatgagacgatggtttctttagcaaagaaaagtttaaatcgattccaatttctt
ttgaaaaatattgattttattcttgtgttgacagatgctgacggctatattttatggcag
tcaggcaatgagcatttgaaagaacatgcacgtgaaatccggttttcacaaggatatcaa
tggacagaatcgatggttggaacgaattcaattggaatcgctttacgaacaaaagaggca
aattttattcacggatacgaacattttgctagagcctcgcacaactggagctgtgtcgca
tctcccgtttttggagaaaatcgagaagttgtaggggtagtcgatttatcaatgcctgca
cattatccgaagaaagaggattttttatttaccgttcaattgattgcggaatttatttca
gaagcattgcaaaggaaagtatttgaagaacagaagtatatgttacaatatttttctagt
aaaaaacaaccaggaatactttgcaactcctccatgaccattttacacatatcccctgaa
ctagtagatgaacctgaagcctatattggaaaaaagctaagtgctcttccaaatgaaaaa
tgggagattgtaaaacgtgatcctattcgaaaagaagatacttgtatcggctattttgtt
tacgttaaacatagaatatttaatcatccttttaagtttcattatgtttcaggtcgaagc
aaaacttttcatcaattattggaagaagtacaaattgttgcaccaacttcagctcccatt
catttatacggtgaaacagggagcggaaaagaagtgttagccaaaacaatccatgaaaac
agtccttttgcagagggaaaactagtttctgtcaattgtggctcgataccggaaaacttg
atggaaagtgaattatttggttatgaaaagggtgcttttacaggagcaaacccaaatgga
tatataggaaaaatcgagcaagcgaataatggtacattatttttagatgaaattgaagat
atgcctgtatcaatgcaatcagacttattacgtgttcttcaggaaaaaaagttaactcga
attggtgggactaaagaaattaatgtaaattttagactcattacagcgagtaatcaggat
ttaaaggcacttgttaaggcaaagaaatttcgaacagatctcttttatcgaatatatgta
tgtccccttcagattccaccgttaagagatagaaaggaagatatacgagagcttatcaag
tattttgaaagcgctaattcttggtatccgttttgggaagaaatgttggttgaagttgcg
gaacagtatccgtggaagggcaatgttcgcgaactgaataatttcttggaaagatgtctt
atttattacagagatcgcatcccaacgaaggagcagttgattcagttgattcagaaaggg
gggttaatcgagtttcaagagacaagtgatacattaagttttaaggaacaaatagaaaaa
gaaaacatttataatgctttagtaaataataacggaaatattccgatggcggcaaaacaa
ctctcgatatcgaaaagtaccctttatcgtaaaataaaaaaatacaagttggattaa
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