Bacillus thuringiensis YWC2-8: AQ980_00475
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Entry
AQ980_00475 CDS
T04752
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bthy
Bacillus thuringiensis YWC2-8
Pathway
bthy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQ980_00475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthy03019
]
AQ980_00475
03009 Ribosome biogenesis [BR:
bthy03009
]
AQ980_00475
Enzymes [BR:
bthy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AQ980_00475
Messenger RNA biogenesis [BR:
bthy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AQ980_00475
Ribosome biogenesis [BR:
bthy03009
]
Prokaryotic type
rRNA helicases
AQ980_00475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ALL56417
UniProt:
A0A9X6Q646
LinkDB
All DBs
Position
complement(62152..63729)
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AA seq
525 aa
AA seq
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MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDARGGGDGRNRDRNR
DGRNRDGNRDRNRDGGSRGRRGEGQGRPGSSNGRGERKHHSRPQA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgattctttactgcaatctgttgaaagtatg
ggctttgaagaggctacaccaattcaagctgaaacaattccacatgcattgcaaggtaaa
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacacataaagaatcggttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagaattatacaaaattggtaagcataaacgtgttcgc
attttaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcctgcaaaacgtagagacagttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagacattgaagcaattttaacagatgtgccagaaacacatcaaacattacta
ttctcagcgacaatgccggatccaatccgccgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttattagatattcaatctcca
gagcttgcaatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgctgcagaaggtattcacggtgatttaactcaggcgaaacgtatg
tctgtattacgtaaatttaaagaaggttctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacgcacgtatataacttcgatattccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggtcgtgcaggtaaaaaaggtattgca
atgctatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaaatggaccgtatggatgcaccgacacttgacgaggcattagaaggtcaacaacgt
ttaatcgctgaaaagcttcaaagcacaattgaaaatgaaaacttagcatactacaagcgt
attgcagaagaaatgttagaagaaaatgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccgatcgctttaacatcagaaccacctgttgtt
tcaagaggcggcggttctaaaaaacgcggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatgcacgcggcggtggcgatggacgtaatcgtgaccgtaaccgt
gatggacgtaatcgtgacggaaaccgtgatcgcaatcgtgatggtggtagtcgtggtcgt
agaggtgaaggccaaggtcgccctggttcttcaaatggacgcggcgaaagaaaacatcat
agccgtccacaagcttaa
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