Burkholderia thailandensis E444: BTJ_1268
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Entry
BTJ_1268 CDS
T03112
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
btj
Burkholderia thailandensis E444
Pathway
btj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BTJ_1268 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btj03400
]
BTJ_1268 (recB)
Enzymes [BR:
btj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BTJ_1268 (recB)
DNA repair and recombination proteins [BR:
btj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTJ_1268 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
AHI79791
LinkDB
All DBs
Position
1:complement(1476370..1480188)
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AA seq
1272 aa
AA seq
DB search
MSHAAQSGLPSSELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFVARLFETTLAPGRGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAQPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESTARAHFDAAA
AIWRDERGVLDALLADAQPSLNQRSHKPDAVSEALDAWARYFEQASAVAALPRAALKLTQ
SSLEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDTAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRVWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAGPGGTEDAAGDAS
GNDGHARAAAAGAVAPPSADTDAMGWVERFSRYRLLWRERGFAVMWRTLASELRIAERLM
AGPDGERRVTDINHLAELTQARASAQPGIAPTLRWLAAQRFDGGGDDAQLRLESDRNLVQ
IVTVHKSKGLEYAIVFCPFLNDGGLREPPGSGLPDAREYHDESGVAVLHYGCDEEAAERA
SREAAREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFD
AWLKEPPEDAELAVRWQALAGGPVTLGALPVPARREPLEAGHDANATRAARRAKRGLRDA
WRIASFSSLASAIARDESGVARAADDEMRPDHDALAAAVGADVLDAFDTLDAAGAIVEAA
AIASEPAEDDILAFPRGAAAGECLHRLLELSDFSDASTWPPAAQRALHERPVEAEPALAG
RLPAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYP
DVALEAGTLAGFIKGFIDMIVEHDGRFWIVDWKSNHLGTTPDAYGERALDAAMAHHAYHL
QALLYTVALHRYLRVRMRDYDYDAHVAGYLYLFVRGVRPDWRSGGASAGVHARRPARALI
EALDALMLEGGA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgcagcgcaatccggcctgccgtcgagcgagctcgacgtcttcgcgtgcccg
ctcgacggcgtgaaccagatcgaggcgtccgccggcaccggcaagacgtggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acctttacgaaggcggcgacggccgagttgcacgagcggattcgcgctcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgatgacggcggcgatccgttcgtcgcacgcctgttc
gagacgacgctcgcgcccgggcgcggcctcgatccgcaaacggccgcgaagcgcgtgcgc
cgcgcgctgcgcgcgttcgaccaggcggcgatccacacgatccacgcgttctgtcagcgg
gcgttgcaggaagcgccgttcgcggcggcaatgccgttcgcgttcgagatggaggcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgcgtcgagccggtc
gcggcggcccagccggcgttcgccgagtggctcgtcgaatacggcgcggggcccgcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgcttgcgcgattgcgctgggacggg
ctgcacgcggctgacgacggtgcggaaagcaccgcgcgcgcgcacttcgatgcggcggcc
gcgatctggcgtgacgagcggggcgtgctcgatgcgctgctcgccgacgcgcaaccctcg
ttgaaccagcgctcgcacaagccggacgccgtgagcgaggcgctcgacgcgtgggcgcgc
tacttcgagcaggcgagcgcggtggctgcgttgccacgcgcggcgctcaagctcacgcag
tcctcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggccgtcgctgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacaccgcgcccgccgagcttgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgacacgatcttcgcgcctgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcgatgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgagccggtgcgcgcgggctcgcgcgtgcgcgcgccgctc
gtcgacgcgaccgatccgctcgccggcgcgggcgacttccgcgtctggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgatgcgcagcggcacgccgcgcatgcatgcgcggcg
gagatcgcgcggctgatgcgcggcgcgcgcgagcgtgcggtgacgctcggcggcgaaccg
ctcgcggcgtccgacattgcggtgctcgtgcagacgcaccggcaaggcagcctcgtgaag
cgcgtgctggccgcgtgggggatcggcagcgtcgagctcgcgcaggcatcggtgttcgcg
acgatcgatgccgagcaactcgagcgcgtgctggcggcgatcgacgcgccgggcgatctg
cggcgtctgcgctcggcgctcgcgtctgactggttcggactcgacgcggcggcgctctgg
cgtctcgaacagggcgacgcggggccgggcggtaccgaagacgccgcaggcgatgcgagc
gggaacgacggccatgcgcgcgccgcggcggcgggcgcggttgcgccgccgtccgcggac
accgacgcgatgggttgggtcgagcgcttctcgcgctaccggctgctgtggcgcgagcgc
ggcttcgcggtgatgtggcgcacgctcgccagcgagctgcgtatcgccgagcggttgatg
gcggggccggacggcgagcggcgcgtgaccgacatcaatcatctggccgaactgacgcag
gcgcgcgcgtccgcgcagccgggcatcgcgccgacgctgcgctggctcgccgcgcagcgc
ttcgacggcggcggggacgatgcgcaactgcggctggaatccgatcgcaatctcgtgcag
atcgtcaccgtccacaagtcgaaggggctcgaatacgcgatcgtgttctgcccgttcctg
aacgacggcgggctgcgagagccgcccggttccggcctgcccgacgcgcgcgaatatcac
gatgagtcgggcgtcgcggtgctgcattacggctgcgacgaagaagcggccgagcgcgcg
tcgcgcgaggcggcgcgcgagcaggcggccgagcgcgcgcggctcgtctacgtcgcgctc
acgcgcgcggtctaccggtgctatctggtcgcgggcacctaccagtcgtcgcgctcgacg
aaggaggcgcgacgcagcgtgctgaactggctcgtcgcgggcgcgggccgcgatttcgat
gcgtggctgaaggagccgcccgaagacgcggagctcgccgtgcgctggcaggcgctcgcc
ggcggcccggtgacgcttggcgcgctgccggtgcccgcgcgtcgcgagccgctcgaggcc
ggacacgacgcgaacgcgacgcgagccgcgcggcgcgcgaagcgcgggctgcgcgacgca
tggcggatcgcgagcttcagctcgctcgcgtcggcgatcgcgcgcgacgagagcggtgtc
gcgcgtgcggccgacgacgagatgcgccccgatcacgacgcgcttgcggcggcggtcggc
gcggacgtgctcgatgcgttcgatacgctcgatgcggcgggcgcgatcgtagaggccgcg
gccatcgcgagcgagcccgccgaagacgatatcctcgcgtttccgcgcggcgcggcggcg
ggcgaatgcctgcaccggctgctcgagctgagcgatttttccgacgcgtcgacgtggccg
ccggccgcgcagcgcgcgttgcacgagcgccctgtcgaagcggagcccgcgcttgccggg
cggctgcccgcgatgatgacgcggctcgtcgccgatctcgcggcaacggagctcgtgccg
ggcatgcgcctggcggcactcgacccggcgcggcggctgacggaaatggaattcctgttt
cccgcgcccgcgctcgatttcaacgcgttgcggcggttgctcgccgcgcacggctatccg
gacgtcgcgctcgaagccggcacgctcgccgggttcatcaaaggattcatcgacatgatc
gtcgagcacgacggccgcttctggatcgtcgactggaagtcgaaccatctcggcacgacg
cccgacgcgtacggcgagcgcgcgctcgacgccgcgatggcgcaccacgcatatcatctg
caggcgctgctctatacggtcgcgctgcatcgctatctgcgcgtgcggatgcgcgactac
gactacgacgcgcatgtcgcgggctacctgtacctgttcgtgcgcggcgtgcgccccgat
tggcgaagcggcggcgcgagcgccggcgtgcacgcgcgccggcccgcgcgcgcgctgatc
gaggcgctcgacgcgctgatgctcgaggggggcgcatga
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