Burkholderia thailandensis E444: BTJ_1430
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Entry
BTJ_1430 CDS
T03112
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btj
Burkholderia thailandensis E444
Pathway
btj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTJ_1430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btj03019
]
BTJ_1430
Enzymes [BR:
btj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTJ_1430
Messenger RNA biogenesis [BR:
btj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTJ_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AHI77331
LinkDB
All DBs
Position
1:complement(1661072..1662517)
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AA seq
481 aa
AA seq
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MSDSVAKPVDATFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVA
EGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRTLSLETLELDLPRHRHDERGGRRERERDERRGASAGRRSAGG
ERAHHPRREAPIDDFFLKPYVPSSSANQPEEAKPAQPEKKAPKQPLAALLGGFGMPRKTS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgttgccaagcctgtcgacgcgacgttcgatcaattcggccttgccgcc
gagatcctgagagcgattgccgagcagggctatacgacgccgacgccgatccaggcgaac
gcgattccggtcgtgctgtccggccgcgacgtgatgggcgccgcgcagaccggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcggctgctgccgcaggcgaacacgagc
gcgtcgccggcgcgccacccggtgcgcgcgctgattctcacgccgacccgcgagcttgcc
gaccaggtcgccgcgaacgtgcatgcgtatgcgaagcacacgccgctgcgcagcgccgtc
gtgttcggcggcgtcgacatgaacccgcagatggccgaactgcgtcgcggcgtcgagatc
ctgatcgcgacgcccgggcgcctgctcgaccacgttcagcagaagaccgcgaatctcggc
caggtgcagatcctcgtgctcgacgaggcggaccggatgctcgacatgggtttcctgccc
gatctgcagcgaattctgaacctgctgccgaaagagcgtcagacgctgcttttctcggcg
acgttctcgcccgagatcaagaagctcgcgtcgacctacctgcgcaatccgcagacgatc
gaggtcgcgcgcagcaacgcggccgcgtcgaccgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtcaagctgatccgcgatcgctcgctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccgcctcgcgcgccagatcgagcgcgac
ggcatcgtcgcggccgcgattcacggggaccgttcgcagagcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaagcgctcgtcgcgaccgacgtcgccgcgcgcggc
ctcgacatcgccgaactgccggccgtcatcaacttcgatctgccgttcaatgcggaagac
tatgtgcaccggatcggccgcaccgggcgcgcgggcgcgtcgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcaactcgccgacatcgagaagctgatcaagcggacactg
tcgctcgaaacgctcgagctcgacctgccgcgccatcgccacgacgagcgcggcggccgc
cgcgaacgcgagcgcgacgagcgccgcggcgcatcggccggccgccgctcggcgggcggc
gagcgcgcgcatcatccgcgccgcgaagcgccgatcgacgatttcttcctgaagccgtac
gtgccgtcgtcgtccgctaaccagccggaagaggcgaagccggcgcagccggagaaaaag
gcgccgaagcagccgctcgccgcgctgctgggcggcttcgggatgccgcgcaagacgtcg
tcttga
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