Burkholderia thailandensis E444: BTJ_1956
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Entry
BTJ_1956 CDS
T03112
Name
(GenBank) RHS repeat-associated core domain protein
Organism
btj
Burkholderia thailandensis E444
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
RHS_repeat
FG-GAP_3
SpvB
FG-GAP
DUF6443
TcdB_toxin_midC
Motif
Other DBs
NCBI-ProteinID:
AHI77613
LinkDB
All DBs
Position
1:2246379..2252477
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AA seq
2032 aa
AA seq
DB search
MAKTSGTADEILNLPSGGGSVGGDGGDFSVDLNTGTATLKFDLTVPAGPNGITPPHTLQY
SAGAGDGAFGIGWSLGLMTIRRRITPATGAAEPAPPGACTLVGVGELVDMGARRFRPIVD
ATGLLIEFTGASWTATDKTDTQYTLGTSANAQIGDGGALPAAWLVDRCADSAGNAIAYTW
LAVGGARVPQTIAWGTHRLVFAYEDRPDTIVDGSYGAPVTLDKRCSRIELHATTETPSLV
RSWTLLYDDDNGRGRSLLATIREQGHAADGSVLAAPDRTFAYSRPGAPALVPVTGWTTPL
SDPDTDLVDLNGDGLPDIVHLGNGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFA
DMSGNGSVDVLVLDEPFSGYYPLSAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNG
DGVTDILLDTGRGWLIYLRDGPATWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDI
VRVTGGGLTYWPARADGGWDAAIAMTPSPAFARDFDPHRLALYDVDGDGCADLVYVGLQS
VTVWRNVGATRLAAPVAIPGTPIALPGSYRVVDLLGSGTAGVHFQLPSIAGASRQTYLDL
GGGVKPYLLTDLAHGDAQSTHIGYRTSTEYARDDAQAGAPWRTYHPFPIQCVARTDQTDH
GTGATTSTRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPAR
PLAGDEALKLGALRRKPLVTATYGLDGSPLERHPYSITRHAYDALLVASAAGNGKRIAVP
YCTTSTEERWERQSAAVSTRTVDYLAITSEGDVTSQRTRAQRAGVAAPDQDVTTTTTLAT
GGKNLRLPARITQSAPDGSIVSESVCFYDGDAFAGLPEGQAARGLVTRIEDRVFDDAFAA
SIWGENLPDLTRYGYHRLPGDAAGWWKTRRAHERGSNATGPTLATKGPLGALQTLQYDAS
GQRVVKVIDALGNAVSATTDARVFQTASLTDANGHLTTDAFDALGRVVATIGPLDTPALP
TIAFTYATGAISTVTSATRSAHGGNDTVCAVTWIDGTGNVLGKGTPAAGPGEWTVTNAVR
RNARGLVAASFLPYAATGGNWQPPSAGTGATTSTYDALGRLVQLTRPDGLVVTSRREGGT
VITSETWPGGAAVDIERQEYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVTLPGGAH
VAFALDLLGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTEVDAMNRVTNVYHDA
EPTPRVRYEYADANGAPPADGIVANRFTRVWRITDELGAIVFEYDEAGRRTATTRTVAST
AQSFVTRRAYDALGRLASATLPATAPGGAGRTVVYGYAADGRLVSASGVVKRAAYDLFGR
LTSIDYANGASTLIDYAANAGGIARVRVLDASRNVLRDTTLTRGDGLVTTLASANAADDS
VDFGYDALRRLTSANYRQGASPADAHGWTFDDAFNATAVTDAGALTYEPGTHRLASVGGA
ATAFDAAGRMTTGRFGAATFDAADHLSGVTLPDATQIAHTYDYQGRRVRSTQNGAQTYFS
PTEDVEFQGGTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTP
FGYARPADGAAPAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSVYTVG
AWNPYVYCLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSAN
IGGWLLAGVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGALGGAAAAGI
DTLIGGTKTFLSFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGT
LLGAGIGAIAGTGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLTQLS
MPNGFNAGNMLGLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGF
SYAHQISLLLGAAPYFIDYAATMAQIVDASGVNNFEMAFNNAFGSGSPSNTG
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagacaagcggtaccgccgacgagatcctgaacctgccttcgggcggcggatcg
gtcggcggcgatggcggcgacttcagcgtcgatctgaataccggcaccgcgacgctgaaa
ttcgatctgacggtgccggccggcccgaacggcatcacgccgccgcacacgctgcagtat
tcggcgggcgcgggcgacggagcgttcggcatcggctggtcgctcgggctgatgacgatc
cgccgcaggatcacgccggcgacgggcgcggccgagcccgcgccgcccggcgcgtgcacg
ctcgtcggcgtcggcgagctcgtcgacatgggcgcgcgccgctttcgtccgatcgtcgac
gcgacgggactgctgatcgagttcacgggcgcgtcatggacggccaccgacaagaccgac
acgcagtacacgctcggcacgagcgcgaacgcgcagatcggcgacggcggcgcgctgccc
gccgcgtggctcgtcgatcgctgcgccgacagcgccggcaacgcgatcgcgtacacgtgg
ctcgccgtcggcggcgcccgcgtgccgcagacgatcgcgtggggcacgcatcggctcgtc
ttcgcgtacgaggaccggcccgacacgatcgtcgacggcagctacggcgcgcccgtcacg
ctggacaagcgctgcagccgcatcgagctgcacgcgacgacggaaacgccaagcctcgtg
cgcagctggacgctgctgtacgacgacgacaacggccgcggccgctcgctgctcgcgacg
atccgcgagcagggccacgcggccgacggctcggttctcgccgcgcccgatcgcacgttc
gcgtattcgcggcccggcgcgcccgcgctcgtgccggtgacgggctggacgacgccgctg
tcggacccggacaccgatctcgtcgacctgaacggcgacgggctgcccgacatcgtgcat
ctcggcaacggcatgccgacgatgcatccgaacctcggcggcgggcagttcggcgcgccg
cgcccgctcgcgcgcaccgccgcgccgctgcggctgtccgcgccgtcggtcgcgttcgcg
gacatgtcgggcaacggcagcgtcgacgtgctcgtgctcgacgagccgttctccggctac
tacccgctgtccgcgccgggcggctcggcgcccgcgggcttcggccggccgatcgtgttc
gagcgcgcgcccgccgtctcgccgagcgacgtgcggctgcgcttcgtcgatctgaacggc
gacggcgtcaccgacatcctgctcgacaccggccgcggctggctgatctacctgcgcgac
ggcccggcgacatggtccgacgcgccgcgcgtgctgccgcccgcgcgcacgccgcccgtg
tcgctcgccgatccgcacgtgcatctcgccgacatgacgggcgacgggctgatggacatc
gtgcgcgtgacgggcggcgggctcacgtactggcccgcgcgcgcggacggcggctgggac
gcggcgatcgcgatgacgccgtcgcccgcgttcgcgcgcgatttcgatccgcaccggctc
gcgctgtacgacgtcgacggcgacggctgcgcggatctcgtctacgtcggcctgcaatcc
gtcacggtgtggcgcaacgtcggcgcgacgcggctcgccgcgcccgtcgcgatccccggc
acgcccatcgcgctgccgggcagctaccgggtcgtcgatctgctcggctcgggcacggcg
ggcgtgcatttccagctgccgtcgatcgcgggcgcttcgcgccagacctatctcgatctc
ggcggcggcgtgaagccgtacctgctgaccgatctcgcgcacggcgacgcgcagagcacg
cacatcggctaccgcacgagcaccgagtacgcgcgcgacgacgcgcaggccggcgcgccg
tggcgaacctatcacccgtttccgatccagtgcgtcgcgcgcaccgaccagaccgaccac
ggcaccggcgcgacgacgtcgacccgctacgcgtatcacgacgcgcgctacgatcccgcg
acgcgcacgttcctcggcttcggccgcgtcgacagcgagcagttgggcgacgcgtcgtgc
ccgacgctgcgcgtcgagacgacgttccatctcgggctcgatccggccgatccggcccgc
ccgctcgcgggcgacgaggcgctgaagctcggcgcgctgcgccgcaagccgctcgtcacc
gccacgtacgggctcgacggctcgccgctcgagcgccacccctattcgatcacgcggcac
gcatacgacgcgctgctcgtcgcgtcggcggcgggcaacggcaagcggatcgcggtgccg
tactgcacgacgtcgaccgaggagcgctgggaacgccagagcgccgccgtatcgacgcgc
accgtcgactatctcgcgatcacgagcgaaggcgacgtcacgtcgcaacgcacccgagcg
cagcgcgccggcgtcgccgcgcccgaccaggacgtgacgacgacgacgacgctcgccaca
ggcggcaagaacctgagactgccggcgcgcatcacgcaatccgcgcccgacggaagcatc
gtgtccgaatcggtctgcttctacgatggcgacgcgttcgcaggattgcccgaaggccag
gcggcgcgcgggctcgtcacgcgcatcgaggaccgcgtgttcgacgacgcgttcgccgcg
tcgatctggggcgagaacctgcccgatctcacccgatacggctaccaccggctgccgggc
gacgcggccggctggtggaaaacgcggcgcgcgcacgaacgcggctcgaacgcgaccggc
ccgacgctcgcgacgaaaggcccgctcggcgcgctgcagacgctgcaatacgacgcgagc
ggccagcgcgtcgtcaaggtgatcgacgcgctcggcaacgcggtgtcggcgacgacggac
gcgcgcgtgttccagaccgcctcgctcaccgacgcgaacggccatctgacgaccgacgcg
ttcgacgcgctcggccgcgtcgtcgcgacgatcggcccgctcgacacgccggcgctgccg
acgatcgcgttcacgtacgcgacgggcgcgatctcgacggtgacgagcgcgacgcgcagc
gcacatggcggcaacgacaccgtgtgcgccgtcacgtggatcgacggcaccggcaacgtg
ctcggcaagggcacgcccgccgccgggcccggcgagtggaccgtcacgaacgcggtgcgg
cgcaacgcgcgcggcctcgtcgccgcatcgttcctgccgtacgcggcgacgggcggcaac
tggcagccgccgtccgccggcaccggcgcgacgacgtcgacctacgacgcgctcggccgg
ctcgtgcagctcacgcggccggacgggctcgtcgtcacgagccgccgcgaaggcggcacg
gtgatcaccagcgaaacctggccgggcggcgcggccgtcgacatcgagcggcaggagtac
gacgccgcgggccagctcgtgtcggtctcgcgcaacgcgggcgatcactgggtcgagcag
cgctacgcgtacgcgccgtcgggcaaggtacgcgacgtgacgctgccgggcggcgcgcac
gtcgcgttcgcgctggacctgctcggccgcgtgttcgcgcagcaaagccccgacacgggc
cgcaccgtgttcctcctcgacgcatcggacaatcagcgcgcgcgcacgaacgcggctggc
cagatcgtgcgcaccgaagtcgacgcgatgaaccgcgtgacgaacgtgtatcacgacgcg
gagccgacgccgcgcgtgcgctacgaatacgccgacgcgaacggcgcgccgcccgccgac
ggcatcgtcgcgaatcgcttcacgcgcgtgtggcgcatcaccgacgagctcggcgcgatc
gtcttcgaatacgacgaggcgggacgcaggacggcaaccacgcgcaccgtcgcgagcacc
gcgcaaagcttcgtcacgcggcgcgcgtacgatgcgctcggccgcctcgcgagcgcgacg
ctgcccgcgaccgcgccgggcggcgcgggccgcacggtcgtctacggctacgcggccgac
ggccggctcgtcagcgcatcgggcgtcgtgaagcgcgccgcctacgatctgttcggacgc
ctgacgtcgatcgactacgcgaacggcgcatcgacgctgatcgactacgcggcgaacgcg
ggcggcatcgcgcgcgtgcgcgtgctcgacgcatcgcgcaacgtgctgcgcgacacgacg
ctcacgcgcggcgacggcctcgtcacgacgctcgcgagcgcgaacgccgcggacgacagc
gtcgacttcggctacgacgcgctgcgccggctgacgagcgcgaactaccggcaaggcgcg
tcgcccgccgatgcgcatggctggactttcgacgatgcgttcaacgcgacggccgtcacc
gacgcgggcgcgctgacgtacgagccgggcacgcaccggctcgcgtcggtcggcggcgcg
gcgaccgcgttcgacgcggccggccggatgacgacgggccgcttcggcgcggcgacgttc
gacgcggccgatcacctgagcggcgtcacgctgccggacgcgacgcaaatcgcgcacaca
tacgactaccagggccgccgcgtgcgctcgacgcagaacggcgcgcagacgtatttcagt
ccgaccgaagacgtcgaattccagggcggcacggcgatcgtgtggatcacgttcggccgg
cagcgaatcgcggccgacatcggcggcgcgctgacgttcgtgcatccgaacgcgctcggc
gtgatggatctcatcaccgattcgggcggcgcgtacggcacgcgcgtgcggcagacaccg
ttcggctacgcgcgcccggccgacggcgcggcgccggcgggcggcgtcgcggcggtggcg
ctcgcgctcggcgcggcggacgcgacaggcctcgtgtgccacggcctgcgatggtacgac
ccgcgcgtcggccagttcatcagcccggaccccgtcgtgacgagcgtctacacggtcggc
gcgtggaatccgtacgtgtactgcctcggcaatccgatcctgctcgcggacccgaacggc
tgcagcttcctgagcgtgctcgagatcatcggcgtcgcgatcctcgcggcggcctgcgtc
gtcggcgcgattttcacgggcggcgcgacgctcgtcgcgctcggcgtgctgtccgcgaac
atcggcgggtggctgcttgcgggcgtcgcgctcggcagcctcggcggcgcgatcgcgggc
gagctcgccgcgcagaaggcgggcggcaacctgtgggcgggcgcgttcctcggcgcattt
ctcggcggcgcgacgtcgctgatcggcggcgcgctcggcggcgcggccgcggccggcatc
gacacgctgatcggcggcacgaagacattcctgtcgttcgtcgcggcgggcgcgatccag
ggcacgctcgcgggcgcgggcacggggctcgcgatcgggtacgcgggcggcaagggcaac
gccgaatcgatgctgatcgcgatggcgaagggcgccgcatggggcgcggtgctcggcacg
ctgctcggcgcgggcatcggcgcgatcgcgggcacgggcatcagcggcgcggcgaagccg
gacaacttcctgaacatcggcgcgttcggccagaagttcgcggatttcacgagcacctcg
acggcgatcaactcggccgacaacgcggcgggcgtgaccgaatcgctcacgcaactgtcg
atgccgaacggcttcaacgcgggcaacatgctcggcctgctgcccaacctcgtgacgacg
aacgaacaggcggccggctggttctcgataccgatcggctggctcgggccgggcgtgctg
aacgacgcgggattcgcgggtctcgtcgatacgtcgatggcgctcgatcaggcgggattc
agctacgcgcaccagatctcgctgctgctcggcgcggcgccctacttcatcgactatgcg
gcgacgatggcgcagatcgtcgacgcgagcggcgtgaacaacttcgagatggcgttcaac
aacgcgttcgggtcgggaagcccgagcaataccgggtga
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