Burkholderia thailandensis E444: BTJ_3359
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Entry
BTJ_3359 CDS
T03112
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
btj
Burkholderia thailandensis E444
Pathway
btj03030
DNA replication
btj03430
Mismatch repair
btj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTJ_3359
03430 Mismatch repair
BTJ_3359
03440 Homologous recombination
BTJ_3359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btj03032
]
BTJ_3359
03400 DNA repair and recombination proteins [BR:
btj03400
]
BTJ_3359
Enzymes [BR:
btj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTJ_3359
DNA replication proteins [BR:
btj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTJ_3359
DNA repair and recombination proteins [BR:
btj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTJ_3359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHI78060
LinkDB
All DBs
Position
1:3772691..3773830
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AA seq
379 aa
AA seq
DB search
MSASSLIHPAIDTPLAFVDLETTGGSAVEHRITEIGVVVVNANHVSTWTTLVDPQQPIPP
FIQQLTGITDAMVRGAPTFADIAPALLERLDGKLFVAHNASFDRGFLRAEFERAGVAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALVPSARHRALADADLIWQFWQKLHGAIPAEQ
LREQIARTTRRFRLAGALTEAHLESAPAGCGVYALFGDDDAPLYVGRSVRVRQRLRALLT
GERRSAKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRPDRSAAGDAHWPF
VGPVAFEERGESSVFHVVDRWRYVGAASSIEQAATLAADARAAGEGSPDATRAVRRILQT
HLARGLELIPLAGTAPAAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgtcgctgattcatcccgcgatcgatacgccgctcgcgttcgtcgatctc
gaaaccaccggcggctcggccgtcgagcatcgcatcaccgaaatcggcgttgtcgtcgtg
aatgcgaaccacgtgtcgacgtggacgacgctcgtcgacccgcagcagccgattccaccg
ttcatccagcagctcacgggcatcaccgacgcgatggtgcgcggcgctccgacgtttgcc
gacatcgcgcccgcgttgctcgagcggctcgacggcaagctcttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgctgagttcgagcgcgcgggcgttgcgttcaatccg
gatgtgctttgcacggtgcggctgtcgcgcgcgctgtttccgcgtgagtcgcgtcacggg
ctcgacgcgttgatcgagcggcacgcgctcgtgccgtcggcgcgccaccgggcgctcgcc
gacgcggatctcatctggcagttctggcaaaaattgcacggcgcgataccggccgagcag
ttgcgcgagcaaatcgcgcgcacgacgcgccggttcaggctcgcgggggcgttgacggag
gcgcacctggaaagcgcgcccgccggctgcggcgtctatgcgctgttcggcgacgacgat
gcgccgctctatgtcggccgcagcgtgcgggtccgccagcggttgcgcgcgctgctgacg
ggcgagcgacgctcggcgaaggaaatgcggcttgcccaactggttcggcgcgtcgaatgg
cgcgagacggggggcgaactcggcgcgctgctggccgaggcggactggatcgcgtcgctc
gcgccatcgttcaaccggcgtccggaccggagcgccgcgggcgatgcgcactggccgttc
gtcgggccggtcgcgttcgaggagcgcggggagtcgagcgtctttcacgtggtcgatcgc
tggcgctacgtcggcgcggcatcgtcgatcgaacaggcggcgacgctcgcggccgacgcg
cgcgcggcgggcgaaggctcgccggacgcgacgcgcgcggtgcggcgcattttgcagaca
catctcgcgcgcggactcgagctgattccgctcgcgggcacggcgcctgccgccgcgtag
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