Bacillus thuringiensis MC28: MC28_0357
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Entry
MC28_0357 CDS
T02263
Symbol
addB
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
btm
Bacillus thuringiensis MC28
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btm03400
]
MC28_0357 (addB)
Enzymes [BR:
btm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MC28_0357 (addB)
DNA repair and recombination proteins [BR:
btm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MC28_0357 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFU11779
LinkDB
All DBs
Position
342876..346376
Genome browser
AA seq
1166 aa
AA seq
DB search
MIGRAGSGKSTLCLREVQEELKQRPRGETILYLVPEQMTFQTQQALIESEDVRGSIRAQV
FSFSRLAWKVLQEIGGASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFFEHLGS
MIAEFKRYNVTPSNVYEMWQQLDAHSSSAEQKLLANKVYDLQLLYDDFERALIGKYLDSE
DYLQLLVEKLPQSEYVNGAEIYIDGFHSFSPQELEIVRQLMICGARVTITLTIDEKTLAQ
PVNELDLFYETTLTYEKIKQVAREEKIEIEKTIPLMEQPRFHSPALAHLETHYEARPNEK
YYDEASVTISTAANLRAEVEGVAREIRRLVADETYRYRDIAVLLRNGESYYDVMRTLFTD
YNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKEMMREE
MDEFENYCLAYGVQGKRWASEDPWMYRRYRSLDDTNGMITDIEREMEEKINRLRDVVRTP
VIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEELRIRAEESGDFLFATDHEQVWEEV
MSLLDTFVEMLGEEKMSLSMFTDVMSTGLEALQFANIPPSLDQVLVANIDHSRLSDVKAT
FIIGVNEGVIPAAPMDEGMLSDEEREVLGAAGIELAPTTRQTLLEEQFVMYQMVTRASEK
LYISCPLADEEGKTLLASSFIKKIKRMFPNVKDSFITNDVNDLSRSEQISYVATPKVTLS
YVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTVVSR
DLYGDKIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKRIADRL
LRENRTWADLSIKECEHLSVLVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRTSIILR
EHAKSSGFVPVDLEVPFGMGGTGSLPPMEFSLPNGVKMEVIGRIDRVDKAEDENGTFLRI
IDYKSSSKALDLTEVYYGLALQMLTYLDVVTTNAQTWMKKGHAASPAGVLYFHIHNPIVE
MKGDASEAEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGSFSARS
SIASEQEFNVLQKYVHHTFENIGKDITEGVIDIAPYKKGNKAACTFCNFKSVCQFDESLE
DNQFRTLKDMKDSEAMEKIREEVDGE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgattggtagagcgggaagtggaaagagtacactttgtttacgagaagtgcaagaagag
ttaaaacagcgcccgagaggcgaaacaatattatatcttgtgccagaacagatgacattc
cagacgcagcaggcgttaattgaaagtgaggatgtaagaggttctattcgggcacaagtt
tttagtttttcacgattagcgtggaaggtgttgcaagaaattggcggagcgagtcgtctt
catattgatgaagcgggtgtgcatatgttacttcgtaaaattgtagaatctcgtaaagat
ggattatcggtgttccaaaaagcagcggagcaaaacggtttctttgagcatcttggcagt
atgattgcggagtttaaacgttacaatgtgacgccatctaacgtatatgaaatgtggcaa
caattagatgcgcatagtagcagtgctgagcaaaagttattagcgaataaagtatatgat
ttacagctattatatgatgattttgaacgtgctttaatcgggaaatatttagattcagaa
gactatttacaattgctagtggaaaagcttccgcagtctgagtatgtaaatggtgctgaa
atttatatagatgggtttcattcattttctccgcaagaacttgaaattgtaagacagctc
atgatttgtggagcgagagtcacaattacgttaacgatagatgaaaaaacattagcgcag
ccagtgaatgaactggatttattttatgaaacgacgttaacatatgaaaaaataaaacaa
gtagcgcgtgaagagaaaatagaaattgaaaaaacaattccacttatggaacaaccgcgt
tttcattctccggcattagctcatttagaaacgcattatgaagcgcgtccgaatgaaaag
tattatgatgaagcaagtgtaacaattagtacagcggcgaatttacgagctgaagtagaa
ggggttgctcgtgaaattcgtagacttgtcgcggatgaaacgtatcgttatcgagatatt
gcagtacttcttcgtaacggggaaagttattacgatgtgatgcgaacgttatttacagat
tataatattccacacttcatcgatgaaaaacgcccgatgtcacatcatccattagtagag
tgtattcgttctgccttagaaattattagcggaaattggcgttatgacgcggtgtttcgc
tgcgtgaaaacagagcttttatatccattagacgtaaggaaagaaatgatgcgtgaagag
atggatgagttcgaaaactactgtttagcgtacggtgtacaagggaagagatgggcttct
gaggatccgtggatgtatcgccgttaccgttcacttgacgatacaaacggaatgataaca
gatattgaacgtgaaatggaagagaaaataaacaggctgcgtgatgttgtaagaacgcca
gttattcgcatgcaaaaaaggttaaagcgtgcgggaacagtgatgcaaatgtgcgaagcg
gtttacttatttttagaagaacttgacgttccaaagaagttagaagaattacgtatacgt
gcagaagagagcggagatttcttatttgcaacagaccatgaacaagtatgggaagaagta
atgagccttcttgatacgtttgtagaaatgcttggtgaggagaagatgtcactatcaatg
ttcacggacgttatgtcgacaggacttgaggcacttcaattcgctaacattccgccatca
ttagatcaagtattagttgccaatattgatcactccaggttatcagatgtgaaagcaacg
tttattatcggcgtaaatgaaggagttattccagcagcaccgatggatgaagggatgctt
tctgatgaggaaagagaagttcttggtgcggcaggaattgaactcgcgccaacgacgaga
caaactttattagaagagcagttcgttatgtatcagatggtaacgagagcgtctgagaaa
ttatatatttcatgcccacttgcagatgaagaaggaaagacattacttgcatctagcttt
attaagaaaataaaaagaatgttccctaatgtgaaagactcgtttattacgaatgacgta
aacgacttatcgcgttcggaacaaatttcatacgtagcaacgccaaaagtgacgttatct
tatgtcatgcagcaactacaaacgtggaagcgatacggatttgaagggaatctagatttt
tggtgggacgtctataacttctacgtcacttcggatgaatggaaacaaaaaagtagtcgc
gtgttatcgagtttattctatcgaaatcgtgcgcagaaactaagtacggtagtaagtaga
gatttatacggagataaaataaaaggaagcgtttctcgtatggaactcttcaaccgttgt
gcgtacgctcatttcgcgcagcacggtttatcgttaagagagcgtgatatttttaaacta
gatgcaccagatatcggtgaactattccatgcagcactgaagagaattgcagacaggcta
ttacgcgaaaaccgcacttgggcggatttatcaataaaagagtgtgagcatctttctgtt
ttagtaatagaagaaatcgcaccgttattacaaagacaaattttattaagctcaaatcgt
catttctatttaaaacaaaaactacaacaaatcattttccgtacgtcaatcattcttcgt
gaacacgcgaagtcgagcggtttcgtaccagttgatttagaggtgccattcggtatgggc
ggtacgggatcgcttccgccgatggaattctcattaccaaatggtgtgaagatggaagtt
atcggccgtattgaccgtgtggataaggctgaagatgaaaacggaacattccttcgtatt
attgattataaatcaagttcaaaagcgttagacttaacggaagtgtattacggattggca
cttcaaatgttaacgtatttagatgtcgtcactacaaatgcacaaacgtggatgaaaaaa
ggccacgcagcatcacctgctggtgtactgtactttcatattcataacccgattgttgaa
atgaaaggtgacgcatctgaagctgaaattgaaaaagaaattttaaagaaatttaaaatg
aaaggcctcgtactaggagatgctgacgttgttcgtttaatggataacaaactttcaaca
ggaagttcagatattatttctgctggtctgaaaaaagacggtagttttagtgcgcgttct
agcattgcaagtgagcaagagtttaacgtactgcaaaaatatgtacaccatacgtttgaa
aatatcggaaaagacattacagaaggtgttattgatattgctccttacaaaaaggggaat
aaagcggcatgtacgttctgtaacttcaaatctgtctgtcagtttgatgaatcacttgaa
gataatcaattccgtacgttaaaagatatgaaagatagtgaagcgatggagaaaattaga
gaggaggttgacggagaatga
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integrated database retrieval system
