Bacillus thuringiensis MC28: MC28_0589
Help
Entry
MC28_0589 CDS
T02263
Name
(GenBank) Sigma54 specific transcriptional regulator, Fis
Organism
btm
Bacillus thuringiensis MC28
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS_4
HTH_50
PAS
PAS_10
AAA_2
Mg_chelatase
AAA_5
AAA
PAS_8
HTH_1
MCM
HTH_8
HisK_sensor
HTH_23
PAS_7
nSTAND3
AAA_16
AAA_3
DUF6075
I-TevI_DNA-bd
HTH_28
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AFU12011
LinkDB
All DBs
Position
559880..562009
Genome browser
AA seq
709 aa
AA seq
DB search
MFSIARNKIRPIVSLPIDQSEKEWNIDVENIKEPFLFLKRGEKLFAYVHVKDLLSNSKDL
HSKALLANAVSLDTICYLSKNISLTALFQIIGAPIAIVKNEMDELIGYIRREDVFAELFK
QENQSVDILKIILTSIPMGIFVVDREKKIVNCNESGLKMIKSTPERVMNVPAEQIFNEGH
INNVFATGKTILNQLQITNEMGVLVDYSPIPNFDGNIEGMVIIVQDLPMVEDMAMEIEYI
KDLNKDLHAILSSIYDEILVVNHKGELIRYSETVINDFWGSNLKDLLGKNLLDLEQKGLF
SPSVTRLVLEQQKKVSVVQETKSGRKILAVGNPVFDENGELHRIIIASRDITEATRLKTE
LHEIKRISEQYKKELDDFKNKDRFLKKLIYCSPKMEQIINQAKKIADFSSNVLISGESGV
GKEVIAQAIHQLGKRSAKPFLKLNCGAIPETLLESELFGYTKGAFTGADKNGKEGYFKRA
DQGILFLDEIGEMPLHLQVKLLRVLQEQEVIPIGSTIPTKINVQIIAATNKSLEKMVEAG
TFREDLFYRLNVIPLQVPPLRERMEDVPVLAFHFLQQLNEKYNKNYHLTPDALNLLEFYS
WPGNVRELQNMIERLVVSADDPVIEAEFVSKFLTPGYDFKKSKPVITRVLPLQEALHSVE
EQLILLAMKQYKTTTKAAKALGISQSSVSRKYQRIVSEKGMPTDIISYS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttttccattgctcgtaataaaattagacctattgtttctctacctatcgatcaatcc
gaaaaggaatggaatatagacgttgaaaatataaaagaaccttttctatttttaaaaagg
ggagagaaattatttgcatacgttcatgtcaaggatctgctatcaaacagtaaggactta
cattccaaggcattgcttgcaaatgcagtttcgctagatacaatatgttatcttagtaaa
aatatttctttaacagctctgtttcaaattattggagcgccgattgcgatagtgaaaaat
gaaatggatgagttaataggatatataagaagagaagatgtttttgcagaactatttaaa
caagaaaatcagagtgttgatatattaaaaattattttaacgtctattccaatggggatt
tttgtagtggatcgtgaaaagaaaattgtaaattgcaatgaatctggtttgaagatgatt
aaatctacacctgaaagagtaatgaatgtaccagcagaacaaatttttaacgaaggacat
attaataacgtatttgcaacgggaaagacaattttgaatcaattacaaatcacaaatgag
atgggtgtattagttgactacagtcccattccaaactttgatggaaatattgaaggaatg
gttattatcgtacaagatttgccgatggttgaggacatggcaatggaaattgaatatata
aaggatttaaacaaagatttgcatgcaattttgtctagtatttatgatgaaatattagtt
gttaatcataaaggggaattaattcgttacagtgaaaccgttattaatgatttttggggg
agtaatttgaaggatcttttaggtaaaaaccttttagacttagaacagaaagggttattt
agtccatctgttacgcgattagtattggagcaacaaaaaaaggtatcagttgtacaagaa
acaaaaagtggaagaaaaatattggcagttggaaatcctgtatttgatgaaaacggagag
cttcatcgtattattattgcttcaagagatattacagaagctacgagattaaagacggaa
ttacatgaaataaagagaatatcagagcaatataagaaggaattagatgattttaaaaat
aaagatcgttttcttaagaaacttatttactgtagtccgaaaatggagcaaattataaac
caagctaaaaaaatagcagatttctcttccaatgttcttatttccggagaatcgggcgtc
gggaaggaagtaattgctcaagcaattcatcaacttggaaagcgatctgcaaagccattt
ttaaaattaaattgtggtgcaattccagaaactttgttagaaagtgaactatttggttat
acgaaaggtgcttttacaggagcagataaaaatggaaaagaaggatatttcaagcgagct
gatcaaggtattttatttttagatgaaattggagaaatgcctctacatttacaggtgaaa
ttgcttagggtcctgcaggaacaagaagtaattcctattggaagtacaatacctacgaaa
ataaatgtacaaattattgccgctacaaataaaagtctggaaaagatggtagaggcagga
acgttccgtgaagatttattttatcgcttaaatgtaattccattgcaagtgcctcctcta
cgagaacgaatggaagatgtcccagtactcgcttttcattttttacaacagttaaatgaa
aaatataataaaaactatcatttaactccggatgcacttaacttactagagttttattca
tggccaggaaatgtacgtgaattacaaaatatgattgaacgtttagtagtatcagcagac
gatccagtaattgaagctgagtttgttagtaagtttttaacccccggttatgactttaaa
aaatcaaaaccagttattacgagagtattaccgttacaagaagcactacattctgtagaa
gaacaattgattttacttgcaatgaagcagtataaaacaacgactaaggcagcaaaagct
cttggcattagccaatcttcagtgagtcgaaaatatcaaaggattgtcagtgaaaaagga
atgccaactgatataatctcgtattcctaa
DBGET
integrated database retrieval system
