Bacillus thuringiensis MC28: MC28_1680
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Entry
MC28_1680 CDS
T02263
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC28_1680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btm03019
]
MC28_1680
03009 Ribosome biogenesis [BR:
btm03009
]
MC28_1680
Enzymes [BR:
btm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MC28_1680
Messenger RNA biogenesis [BR:
btm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MC28_1680
Ribosome biogenesis [BR:
btm03009
]
Prokaryotic type
rRNA helicases
MC28_1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_19
RRM_ESF1
Motif
Other DBs
NCBI-ProteinID:
AFU13102
LinkDB
All DBs
Position
1641469..1642821
Genome browser
AA seq
450 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPVPKPAPKKSGQNRQRDSREGSRRDSRNSSRSDSR
NGSRHENNQSFKKPSNKKSSTNQGQKRRGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacggaagcaacaccaattcaggaaaaagcaattcctgttattatg
tcaggtaaagatattattgggcaagcgaaaacaggaacgggtaaaacattagcatttgtc
ttaccgattttagaaaaaatcgatccagagtctagtgatgttcaggctttaattgttgca
ccaacaagggaactagcattgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatttatggcgggcaagatgtagcacaacaattgagaaag
ttaaaaggtaatacacatattgttgtagcaacaccaggacgattattagatcatatacga
cgtgaaacaattgatctaagtaatctttcaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctggtagcaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaaacgttat
atggatgagccgcaaatgattcaagtacaaagtgaagaagtaacggtagatacaattgaa
cagcgtgtcattgagacgacagatcgtgcaaagccagatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagttg
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactatgat
atccctgaagatgtagaaagttatattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagagaaataatcgaacaaccgaagataaaacgtgta
gatgaaaatggaaaaccggtaccaaagccggctccaaagaaatcaggtcaaaatcgtcaa
agagatagccgtgaaggttcaagacgtgattcgagaaatagctcaagaagtgattcgaga
aatggttcgagacatgaaaataatcaatcatttaaaaagccaagcaataagaaaagtagt
acaaatcaaggtcagaaaagacgtgggcgttaa
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