Bacillus toyonensis biovar Thuringiensis: MC28_3056
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Entry
MC28_3056 CDS
T02263
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
btm
Bacillus toyonensis biovar Thuringiensis
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btm03032
]
MC28_3056
03400 DNA repair and recombination proteins [BR:
btm03400
]
MC28_3056
Enzymes [BR:
btm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MC28_3056
DNA replication proteins [BR:
btm03032
]
Prokaryotic type
DNA Topoisomerases
MC28_3056
DNA repair and recombination proteins [BR:
btm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MC28_3056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AFU14478
LinkDB
All DBs
Position
complement(3006439..3008427)
Genome browser
AA seq
662 aa
AA seq
DB search
MGHVRDLPKSQMGIEVKNNFTPKYITIRGKGPVLKDLKSAAKKAKKVYLAADPDREGEAI
AWHLANTLNVDVESDCRVVFNEITKDAIKESFKHPRAINMDLVDAQQARRILDRLVGYNI
SPLLWKKVKKGLSAGRVQSVAVRLIIEREREIQNFEPEEFWTIKTEFVKGKDTFEASFYG
LDGEKVQLTNETQVNEIIEQMKDNAFSVENVTRKERKRNPALPFTTSSLQQEAARKLNMR
AKKTMMLAQQLYEGIDLGKQGTVGLITYMRTDSTRISETAQTEARTYITEAYGAEYIGTE
KKKETKKSNAQDAHEAIRPTSVMRKPEELKSFLGRDQLRLYKLIWERFVASQMASAIMDT
VTAKLINNNVQFRASGSVVKFPGFMKVYVESKDDGAEEKDKMLPPLEVGETVFSKDIEPK
QHYTQPPPRYTEARLVRTLEELGIGRPSTYVPTLETIQKRGYVALDNKRFVPTELGGIVI
ELILEFFPEIINIEFTANMEQSLDEVEEGNANWVKIVDDFYVGFEPRLEKAEKEMREVEI
KDEPAGEDCELCGHPMVFKMGKYGKFMACSNFPDCRNTKPIVKEIGVICPKCEEGQIIER
RSNKKKRLFYGCGTYPECDFVSWDKPIGRKCPKCEGMLVEKKLKKGVQVQCISCDYEEEQ
QM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggacatgttcgcgatttacctaaaagccaaatggggatagaagtaaagaacaacttc
accccgaagtatattaccattcgtggtaaaggtcccgttttaaaagatttaaaatcagcg
gcaaaaaaagcaaagaaagtctatctcgcggccgatccagaccgtgaaggagaagcaatt
gcttggcatttagcgaatacgttaaatgtggatgttgaatcagattgtcgagttgtcttc
aatgaaattacaaaagatgcaataaaagaatcatttaaacatcctcgtgcaattaatatg
gatttagtagatgcacaacaagcaagacgtatacttgatcgtctagttggttacaatatt
agtcctttattatggaagaaagtaaaaaaaggattaagtgcaggtcgtgtacaatctgta
gcagttcgtttaattatcgaacgtgaaagggagattcaaaactttgagcctgaagaattc
tggacaattaaaacagagtttgtaaaagggaaagatacatttgaagcaagcttttacggt
ttagatggtgaaaaggttcaattaacgaatgaaacgcaagtgaatgaaataattgaacag
atgaaagataatgcgttttcagttgaaaatgtaacgagaaaagagcgaaaacgtaatccc
gctttaccgtttacaacatcttccttgcaacaagaagcagcacgtaagttaaatatgcga
gcaaagaaaacaatgatgcttgcacagcaactgtatgaagggatagatcttgggaaacaa
gggactgtgggtcttataacgtatatgagaactgactcaacgcgtatctcagaaacagct
caaacagaggctcgtacttacattactgaggcgtatggtgcggaatacataggaacagag
aagaagaaagaaacgaaaaaatcaaatgcacaagatgcgcatgaggcaattcgtcctact
tcggtaatgagaaagccagaggaactaaaaagtttcttaggtcgtgaccaacttcggttg
tataaattgatttgggagcgatttgttgcaagtcaaatggcgtctgctataatggatact
gttacagcgaaactcattaataacaatgttcagttccgtgcaagtggctcggttgtaaag
ttcccggggtttatgaaagtgtatgttgagtcaaaagatgatggtgcggaagaaaaggat
aagatgttgccaccgttagaagtgggagaaacggtattttcaaaagatatagagccgaaa
caacactatacccaaccaccgccacgttatacagaggctcgtttagtaagaacacttgaa
gaacttgggattggaagaccatccacttatgtgccgacacttgaaacaattcaaaaacgc
ggttatgttgctttagataataaacgtttcgttccaactgaattgggtggaatagtaatc
gaacttattttagagtttttcccagaaattattaacattgaattcacagctaacatggag
caaagccttgatgaagtggaagaaggaaatgcgaattgggtgaaaattgttgatgatttc
tacgtaggatttgaaccgcgcttagaaaaagcggaaaaagaaatgcgtgaagtggaaatt
aaagatgaaccagctggggaagactgtgaattatgtggtcatccaatggtctttaaaatg
ggtaaatatgggaagtttatggcttgctcgaatttccctgattgtcgtaatacaaaaccg
attgtgaaagaaatcggtgtaatttgtccgaagtgtgaagaaggacaaattattgaacgt
cgtagtaacaaaaagaaacgtcttttctacggatgcggtacgtatccagaatgcgacttt
gtatcttgggataagccgattggccgtaaatgtccgaagtgtgaagggatgcttgtagag
aagaagttgaaaaaaggcgtgcaagtacaatgtatttcgtgtgattatgaagaagaacaa
caaatgtga
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