Bacillus thuringiensis MC28: MC28_3701
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Entry
MC28_3701 CDS
T02263
Name
(GenBank) Exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03410
Base excision repair
btm03430
Mismatch repair
btm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MC28_3701
03430 Mismatch repair
MC28_3701
03440 Homologous recombination
MC28_3701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btm03400
]
MC28_3701
DNA repair and recombination proteins [BR:
btm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MC28_3701
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MC28_3701
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MC28_3701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AFU15123
LinkDB
All DBs
Position
complement(3585154..3587475)
Genome browser
AA seq
773 aa
AA seq
DB search
MLQPKTRWKEKEYNEERVSELAKKLQLSPLVISLFLGRGLDTEDKILDFLNTENQEFHDP
LLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGAEVEFYIPNRFT
EGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEAL
AIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLL
VKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLL
SDDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENKFPPEENKVLVLAKEGWNPGVI
GIVASKLVERFYRPTIVLSIDPVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAA
GMTLHMNDVDELRRRLNAQADAILTEADFIPITAVDTFCKVEDVTLAAIEDMQKLAPFGV
GNPKPRLAVKNAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV
IGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSGEVL
NKFSLEDYKEHLVHASEVTHLDDQYIVLLDLPKGTDELRDLFKVGFPSRIYTLFYQENNH
LFSTVPTREHFKWYYSFLNQKSPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK
DGVIFMAEQKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaaccgaagacgcgttggaaagaaaaagaatataatgaagagcgagtgagtgaa
ttagcaaaaaagttacaactatcaccacttgtcatttcgttattcctcggtagaggatta
gatacagaagataagattttagattttttaaatacagaaaatcaagaatttcacgatccg
cttttattagaaggaatggatagaacggtagaacgtgtaaataaggcgattcaaaatgga
gagcaaatattaatatttggtgattatgatgcggacggagtaagtagtacaacggtttta
tatcttgctctgcaagaattaggtgcagaggtagaattttatattccaaaccgttttaca
gagggttatggaccgaacgaagaagcgtttcgttgggcgcatagtgcagggttctcactt
attattactgtcgatactggtatcgcagcggtacatgaagcgaaggtagcgaaggaactt
ggaatagatcttattattacggatcaccatgagccaccgccagaattaccagaagcactc
gcgattattcatccaaaactagatggcggtgtgtatccgtttcattatttagccggtgta
ggtgttgcgtttaaagttgcacatgcattattaggtcgtgtaccagaacatttattagaa
attgcagtaatcggtacggtagccgatttagtatcacttcatggcgaaaatagattgcta
gtgaagcgcggtttaaaacatatgcgaatgacgaaaaatattggtttaaaggcattgttt
aaagttgctaacgtttcgcaaagtgaaattacagaagaaagcattggattctcaatcgca
ccgcgtattaatgcagttgggcgtttagaagatgctacgccggctgtacacctattatta
tcagatgacccagaggaagcgaaagaactggctgaagaaattgatgagctgaacaaactt
cgaaaagatattgtaaagcaaattacagaagaggctatcgctgaagtggaaaataaattc
ccgccagaagaaaataaagtgttagtgcttgcaaaagaaggctggaatccaggtgtaatt
ggaattgtcgcttctaaattagttgaacgtttttatcgtccaacaattgtattaagcatt
gatcctgtcaaagaaacagcaaagggttcagcacgtagtatcgcgggatttgatttgttt
gcaaacttgtcggattgtagagagttattaccgcacttcggagggcatccgatggccgcg
ggaatgacgctacatatgaatgatgtagatgagttacgtcgccgcttaaatgcgcaagcg
gatgcaattttaacagaagcggattttattccaatcacagcagttgatacattttgtaaa
gtggaagatgtaacgcttgcagcaattgaggatatgcaaaagttagcgccatttggtgtt
ggaaatccgaaaccacgtcttgcagtgaaaaatgctgaattagaaagtattcgtgcaatc
ggatcagatggttcacatttaaaaatggcacttcgtgacggacaggcaacactggataca
attggattcggatttggtgcgtatgcaaaagaaatttctccagttgctaaggtatctgta
ataggagaggcatccattaatgaatggaataattttaagaagccacaattaatggtacaa
gatattgctgtagaggcatggcaattatttgattggcgtagtatgcgtaatgtggaagca
aatttagcagaacttccgaaagaaaaaataacaatggtgtatttttctggagaggtattg
aataagttttctttagaagactataaagaacatcttgtgcatgcatcagaggtaactcat
ttagatgatcaatacatcgtgttactcgatttgccaaaaggaacagatgaattgcgtgat
ttatttaaagtaggattcccatctagaatctatacgttattttatcaagagaacaatcat
ctatttagtacagtcccaacgagggaacattttaaatggtactattctttcttaaaccaa
aaatcaccattttctttaagacaatatggggaacaactatgtcgccataaaggttggtca
aaagatacagtaaatttcatgacacaggtgttttttgagttagaatttgttacaataaaa
gacggtgtcatttttatggccgaacaaaaacaaaagcgtgatttaattgaatcgaacaca
tatcgtgagaaaatgaaccacttacaattagaaaaagaattggtttatagcacatatcag
caactatatacatggtttgaaacgattcgtaatcataaataa
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integrated database retrieval system