Bacillus thuringiensis MC28: MC28_4361
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Entry
MC28_4361 CDS
T02263
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC28_4361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btm03019
]
MC28_4361
03016 Transfer RNA biogenesis [BR:
btm03016
]
MC28_4361
Enzymes [BR:
btm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MC28_4361
Messenger RNA biogenesis [BR:
btm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MC28_4361
Transfer RNA biogenesis [BR:
btm03016
]
Prokaryotic type
tRNA degradation factors
MC28_4361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
S1_RRP5
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
AFU15783
LinkDB
All DBs
Position
complement(4221653..4224085)
Genome browser
AA seq
810 aa
AA seq
DB search
MEEIIQENIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVMMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPEEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFILKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVEE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDSESLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYVINGKVDSETQAKWRENLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEKHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRGGKGKSTGRGSASASTSAS
QPGKKDGNGKKKKGFFENVPGFKKKKKKRK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaaaatattgataagttgttattatttatgagagaagaagcg
tataaaccgttaacgatacaagagttagaagaggcatttggaattgaaggttctgagggc
tttaaagattttgtaaaggcacttgtaatgatggaagagaagggacttgttattcgtaca
cgtagcaatcgttatggtcttcctgaaaagatgaatttagtgcgtggtaagttaattgga
catgcgcgtggctttgctttcgttgtgccagaagagaagaaaacgggagatgatgatctt
ttcattcctcctacagaattaaacggtgcacttcacggtgatacagtattagcacgccta
agttcacaatcaagtggttcacgtcaagaaggttcaattgtacgcattttagaacgtgga
acgaaagaactagttggtacatatacagaatcgaaaaactttgggtttgttatacctgac
aataagcgttggacaagtgatattttcatcttgaaaagcgcatccatgggtgctgtagaa
ggccataaagtagttgttaaaattacgagctatccagagaatcgtttaagtgcggaaggt
gaagttattcaaattttaggtcataaaaatgatccaggagtagatattttatcggtcatc
cataaacatcatttacctttagcatttcctgaggaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagacttgaaagatcgccgtgatttacgtgaccaaatgatt
gtaacgattgatggtgcagacgcgaaggacttagatgatgctgttacagtaacgaagctt
gagaacggtaattacaagcttggtgttcatattgcggatgtaagtcattacgttgaagaa
ggttctccaattgatgttgaagcagcggaaagagcgacgagtgtatatcttgttgatcgt
gtaattccaatgattccacatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacactgtcttgtgaaatggaaatcaacaacttaggtgatgttgtcaaacac
gagattttccaaagtgtgattaaaacgacagagcgtatgacatatgctgacgtaagaagc
attttagaagatgaggacgaagagttaatcaagcgctatgaaccgttagtaccaatgttt
aaagagatgggccaattggcacaaattttacgtgaaaagcgtatgcgccgtggtgcaatc
gactttgactttaaagaagcaaaagtattagtagatgaagaaggaaaaccgactgatgtt
gtaatgcgtgatcgttctgtatcagaaaagttaattgaagaatttatgcttgttgcgaac
gaaacagtagcagaacacttccactggatgaacgtaccattcatgtaccgtgtccatgaa
gatccgaaagaagataagttagagcgattcttcgagtttgtaacgaacttcggatatgcg
gtaaaaggacgtgcgaatgaagtacatcctcgtgcattgcaacaaattcttgaaatggtt
caaggacagcctgaagaagtagtaatttcaacggttatgcttcgttctatgaagcaagca
cgttacgattcggaaagcttaggacatttcggcttatcaactgagttctacacgcatttc
acatcgccgattcgtcgttatccagatacgatcgttcatagattgattcgtgaatacgtc
attaacggtaaagtcgacagtgaaacacaagcgaaatggcgtgaaaacttaccagagatt
gcagagcactcttctaatatggaacgtcgtgctgttgaagcagagcgtgaaacagacgaa
atgaaaaaagcagagtatatggtcgataagatcggtgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacat
gttagttacttaacggatgattactaccgttacgacgagaagcatttcgcaatgatcgga
gaacgtacaggtaacgtattccgcatcggtgacgaaattacaattcgtgttattaacgta
aacaaagacgagcgcgcaattgactttgaaatcgttggcatgaaaggtacacctcgccgt
aagttcaaagatcgtccagtcgttatcgaacagccaagaacaggcagaaagaaacggggt
ggacgtagcgagcgcagtaatgaacgcggtggcgaacgcggtacaggtagaaaatttgac
cgtggtggcaaaggtaaaagcacaggaagaggatcagcatcagcatccacgtccgctagt
cagccagggaaaaaagatggtaatggcaagaagaaaaaaggattctttgaaaacgtacca
ggattcaagaagaaaaagaaaaagcgtaagtaa
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