Bacillus thuringiensis MC28: MC28_4568
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Entry
MC28_4568 CDS
T02263
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC28_4568 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btm03021
]
MC28_4568 (rho)
03019 Messenger RNA biogenesis [BR:
btm03019
]
MC28_4568 (rho)
Transcription machinery [BR:
btm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MC28_4568 (rho)
Messenger RNA biogenesis [BR:
btm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MC28_4568 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFU15990
LinkDB
All DBs
Position
complement(4426458..4427729)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVEGFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaaattaacgaaaaaagaattaatcttcgccatt
ttaaaagctcgagcagaaaaagaaggtttctttttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactattctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaggtttctggt
aaagtacgacctccgaaagaaaatgaacgctattttggattattacaagttgaagctgta
aacggagatgatccagagtcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgcatcatg
gatttaatcgcaccagttggatttggacaacgtggtttaattgttgcgcctccaaaggcg
ggtaaaacaagtctattaaaagaaattgcacacagtgttacaacaaatcatccagaagca
gaattaattgtgcttctaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaagggcgatgttgtaagttctacttttgatgaagtaccagaaaatcatattaaagta
gctgaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagacgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaacctcgttattcccccaagtggt
agaacattatcgggtggtatcgacccagcggctttccatagaccgaagcgtttctttggg
gctgcgcgtaatattgaagagggcggtagcttaacgattttagcaacagcgcttgttgat
acagggtctcgtatggacgatgtaatttacgaggaatttaaaggaactggaaatatggaa
cttcacttagatcgctcattagctgagcgtcgtatcttcccagcgattgatattcgtcgc
tctggtacgcgtaaagaagatctattaattccgaaagagcatttagacaagttgtggggt
attcgtaaaacaatgcgtgatacaccagacttcgttgaaggtttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagactcgaaaagatatgta
acaactaagtaa
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