Bacillus thuringiensis MC28: MC28_4815
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Entry
MC28_4815 CDS
T02263
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MC28_4815 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btm03021
]
MC28_4815 (rpoC)
03400 DNA repair and recombination proteins [BR:
btm03400
]
MC28_4815 (rpoC)
Enzymes [BR:
btm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MC28_4815 (rpoC)
Transcription machinery [BR:
btm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MC28_4815 (rpoC)
DNA repair and recombination proteins [BR:
btm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MC28_4815 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AFU16237
LinkDB
All DBs
Position
4707720..4711331
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNHPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEAILAYQNGYVHLHTRVAVA
ASSVNNVTFTEEQKGKLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAEYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEIY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaacaattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagttcgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctactacaa
gatatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatcacccatcttggatgatcctagatgttcttccagttatcccaccagaactacgccca
atggtacagttggatggtggacgttttgctacttctgatttaaacgacttataccgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacttaggtgcaccaagcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggtcgc
cgtggccgtccagttactggaccaggtaaccgtccattaaaatctctatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttcagtaatcgttgtaggaccgaacttaaagatgtaccaatgtggattaccgaaagaa
atggcgcttgaactgttcaaacctttcgttatgaaagagttagttgaaaaaggtttagca
cacaacattaagagtgctaaacgtaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacactagtagaaggtcgtgcaatccgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggcggttcacgttccg
ttatcatcagaagcacaagcagaagctcgtattcttatgttagcggcacaaaacatcttg
aatccaaaagacggaaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggtgcaatcggtgaaggtatggtcttcaaagatgccaac
gaagcaatacttgcataccaaaatggatatgtacatctgcacacgcgtgttgcagttgct
gcaagttcagtaaataatgtaacgtttactgaagagcaaaaaggtaagcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaacgaa
ccaacaaactcaaaccttgaaaaagaaacaccagcggaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcaccatttagcaagaagattctt
ggtaacatcattgcggaagtattcaagcgtttcaaaattacagagacgtctcgcatgctt
gaccgtatgaagaacttaggatttaaatactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggtgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgt
gttatctctatttggagtaatgcaaaagacgttatccaaggaaaactgatgaagtccttg
aataaacgcaatccaatcttcatgatgagtgattccggtgcccgtggtaacgcatctaac
ttcactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcattgaa
cttccgatcaaatcaagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgctcgtaaaggtcttgccgatacagcacttaagactgccgattctggttactta
acacgtcgtcttgtagacgttgcacaagatgtaattgttcgtgaagatgattgtggaaca
gatcgcggtttactaatcggtgcgattaaagagggtaatgaagtaattgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgtttacgtgtaacactcgccatggtgtatgtaag
aagtgttacggtcgtaacttagcaactggtacagacgtagaagtaggagaagcggtaggt
attatcgcggctcaatctatcggtgagccaggtacacagttaacgatgcgtacgttccat
acaggtggggttgccggtgatgatatcacacaaggtttacctcgtatccaagagatcttt
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaggttgaagcccgtacg
tatgctattccttacggtgctcgtctgaaagtaacgccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaggtaatggtacgtcaaatgctacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgcgaaggtgttactgcaaggtaaacaaccagcaacggctagacctgttctactt
ggtattacaaaagcttcacttgaaactgattcattcttatctgcagcatcattccaagaa
acaactcgtgtcttaactgatgcagcaattaaaggtaaacgtgatgagcttctaggactg
aaagagaacgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgtaaaaacaacacaagatgacatgaatgtagaaaacgatgagatttat
gtggaacagtaa
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integrated database retrieval system
