Bacillus thuringiensis MC28: MC28_4936
Help
Entry
MC28_4936 CDS
T02263
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase ydbR
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC28_4936 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btm03019
]
MC28_4936 (cshA)
03009 Ribosome biogenesis [BR:
btm03009
]
MC28_4936 (cshA)
Enzymes [BR:
btm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MC28_4936 (cshA)
Messenger RNA biogenesis [BR:
btm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MC28_4936 (cshA)
Ribosome biogenesis [BR:
btm03009
]
Prokaryotic type
rRNA helicases
MC28_4936 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_30
RAM
Motif
Other DBs
NCBI-ProteinID:
AFU16358
LinkDB
All DBs
Position
4821455..4822978
Genome browser
AA seq
507 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIENDNLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRSGDGRNRDRNRG
RRGEGQGRPGSSSNGRGERKHHSRPQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgaatctttattgcaatctgttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaatcccacatgcattgcaaggtaaa
gatattattgggcaagcgcagacaggtacagggaaaacagcagcatttggattaccgcta
ttagataaagtagatactcgtaaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgcgttcgt
attttaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcctacaaaacgttgagactgttgttcttgatgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcaattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtattaacgcgcttactagatattcaatctcca
gagcttgcgatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgacttaacacaagcgaaacgtatg
tctgtattacgtaaatttaaagaaggtgctattgaagttcttgttgcaacagatgttgct
gcgcgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgcaggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaggttgaccgtatggaagcaccgacacttgacgaggcactagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgataacttatcatactacaagcgt
attgcagaagaaatgttagaagagaacgactctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccagatacaacaccaatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgcggtggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatggacgcagtggcgatggtcgtaaccgtgaccgtaaccgtggt
cgtagaggtgaaggtcaaggtcgccctggatcttcttcaaatggacgcggcgaaagaaaa
catcatagccgtccacaagcttaa
DBGET
integrated database retrieval system
