Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_20200
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Entry
WQG_20200 CDS
T02504
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WQG_20200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bto03021
]
WQG_20200
03400 DNA repair and recombination proteins [BR:
bto03400
]
WQG_20200
Enzymes [BR:
bto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WQG_20200
Transcription machinery [BR:
bto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WQG_20200
DNA repair and recombination proteins [BR:
bto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WQG_20200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
GAPS4b_N
HHH_XRCC3_RpoA
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AGH39297
LinkDB
All DBs
Position
complement(2162603..2163592)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTLTKSGIGPVTAADITADAD
VEIVNPDHVICHLTDKNASISMRIRVQRGRGYVPASARVHSQHEDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLAAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttttaaagccccacttagtgaatattgaacaggttagt
tcaactcacgcaaaagtgaccttagagccgttagaacgtggctttggccacaccttaggt
aacgcacttcgtcgcattttactttcgtctatgcctggttgcgcagttacagaagtagaa
attgatggtgtattacatgaatacagcagcaaagaaggcgtacaagaagatattcttgaa
gtattgttaaaccttaaaggtctagcggtaaaagtgcaaaataaagacgatattattttg
acactaactaaatctgggattggccctgtaactgcagccgatatcaccgccgatgctgat
gttgaaattgtgaacccagatcacgttatctgtcatttaacagataaaaatgcgtctatt
agcatgcgcattcgtgtacagcgtggtcgtggttatgtgccagcatctgctcgtgtacat
tcacaacatgaagatcgtccaatcggtcgcttattagtcgatgctcgtttctcacctgta
gatcgtattgcttacaatgttgaagctgctcgtgttgaacaacgcacagacttagataag
cttgttattgagatggaaactaatggaacattagatccagaagaagccatccgtcgtgct
gcaacgattttagcagagcaactcgctgcattcgttgatttgcgtgatgttcgtcagcca
gaagtgaaagaggaaaaaccggagtttgatccaattcttcttcgtccagtagatgactta
gagctgacagttcgttctgctaactgtttgaaagcagagacaattcactatatcggtgat
ttagtccaacgtacggaagttgaactacttaaaacccctaacttgggtaaaaaatctctt
actgagattaaagatgtactcgcttctcgtggcttatcactgggtatgcgccttgaaaac
tggccgcctgcaagtattgcagaagactag
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