Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_22140
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Entry
WQG_22140 CDS
T02504
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto00300
Lysine biosynthesis
bto00470
D-Amino acid metabolism
bto01100
Metabolic pathways
bto01110
Biosynthesis of secondary metabolites
bto01120
Microbial metabolism in diverse environments
bto01230
Biosynthesis of amino acids
Module
bto_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WQG_22140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WQG_22140
Enzymes [BR:
bto01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WQG_22140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
BT_3535-like
Motif
Other DBs
NCBI-ProteinID:
AGH39491
LinkDB
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Position
complement(2361915..2363165)
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AA seq
416 aa
AA seq
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MDYFNYKNQQLFAEEVAVADIIEQYGTPAYIYSRATLERHWHAFNNALGNHPHLICFAVK
SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGDAGKVVFSGVAKSHSEIQRALEVGIR
CFNVESIAELHRINQVAGEIGKTAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDVARD
VYRLAKTLPNVQIVGMDCHIGSQLTELQPFLDATDRLIILMEQLKEDGIELHHLDLGGGL
GVPYTNETPPHPSEYATALLAKLKDYPNLEIILEPGRAITANAGILVTKVEYLKENEDRN
FAIVDTGMNDMIRPALYEAYMQIIEVDLSLNREKAVYDVVGPICETSDFLGKQRELMIAE
GDLIAVRSAGAYGATMSSTYNSRPQAVEVMVDGADAHLIKQRAEFADLWRLERLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattattttaactacaaaaaccaacaactttttgcagaagaagttgctgtggcagac
attattgaacaatatggtacgccagcctatatttactctcgtgcaacccttgagcgccat
tggcatgcctttaacaacgcgttaggcaatcatcctcacttaatctgctttgcggtgaaa
tcaaactctaatattgcgttattaaatgtgatggctaggcttggttcaggctttgatatt
gtttcacaaggtgaattagaaagggtacttgctgcaggtggagatgccggcaaagtagtg
ttttctggcgtagcaaaatcgcatagcgaaatacaacgtgcgttagaagttggtattcgt
tgttttaatgtggaaagtattgctgaattacatcgtattaaccaagttgccggtgaaata
ggaaaaacagccccaatctctttgcgcgtgaatcctgatgttgatgcgcatactcacccc
tatatttccactggtttaaaagagaataaatttggcgtaagtgttgatgttgcgcgtgat
gtctatcgtttagccaaaaccttgccgaatgtgcaaatcgtgggaatggattgccatatt
ggttcacaattaaccgagttacaaccgtttttagatgcgacagatcgtttaatcatatta
atggaacaattgaaagaagacggtattgagctacatcacctagacttgggaggaggatta
ggtgtgccttataccaatgaaactcctccgcatccaagcgaatatgcaacagcattgctg
gcaaaattaaaggattatccaaatttagaaatcattttagaaccagggcgagcgattaca
gcaaatgctgggattttggtaactaaagtcgaatacctaaaagagaatgaagatcgtaat
tttgccattgtcgatactggtatgaatgatatgattcgccctgctttatacgaagcttat
atgcaaattattgaagttgatttatcacttaaccgagaaaaagcggtgtacgatgtcgtt
gggccaatctgtgaaacctcggatttcttaggtaaacagcgtgaactgatgatcgctgaa
ggcgatttaattgccgtgcgttctgctggtgcttatggcgcaacaatgtcttcaacttac
aacagccgtccacaggccgtggaggttatggtggatggtgcagatgcccatttaattaaa
cagcgggcagagtttgccgatttatggcgtttagagagattattgccataa
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