Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_8300
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Entry
WQG_8300 CDS
T02504
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WQG_8300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bto03019
]
WQG_8300
03110 Chaperones and folding catalysts [BR:
bto03110
]
WQG_8300
03029 Mitochondrial biogenesis [BR:
bto03029
]
WQG_8300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bto04147
]
WQG_8300
Enzymes [BR:
bto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
WQG_8300
Messenger RNA biogenesis [BR:
bto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WQG_8300
Chaperones and folding catalysts [BR:
bto03110
]
Heat shock proteins
HSP60 / Chaperonin
WQG_8300
Mitochondrial biogenesis [BR:
bto03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
WQG_8300
Exosome [BR:
bto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
WQG_8300
Exosomal proteins of other body fluids (saliva and urine)
WQG_8300
Exosomal proteins of breast cancer cells
WQG_8300
Exosomal proteins of colorectal cancer cells
WQG_8300
Exosomal proteins of bladder cancer cells
WQG_8300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AGH38107
LinkDB
All DBs
Position
complement(900065..901708)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKAFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVSAVVEELKAISKPCESSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDG
TGLEDALDVVEGMQFDRGYLSPYFINKPENGTVELENPYILLVDKKISNIREVLAVLEAV
AKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEELGQAKRVVISKDNTTIIDGIGDEAQIKGRIAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RAATKVAQTLKGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVARNVKDGSGNYGYN
AGTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKDEKADLAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaatttggcaatgatgctcgtgtaaaaatgttaaacggcgtg
aacattcttgcagacgcagtaaaagtaacccttggtccgaaaggtcgtaacgtggtgtta
gacaaagcattcggcgccccaactatcactaaagatggtgtttcagttgcaaaagagatc
gaattagaagataaattcgagaatatgggtgcacagatggttaaagaagtggcatctaaa
gcaaatgatgcagctggtgacggtacaacgaccgcaactgtacttgctcaagctatcgtg
aacgaaggtttaaaagccgttgctgcgggaatgaacccaatggatttaaaacgtgggatt
gataaagcggtttctgcggtagtggaagagttaaaagcgatttctaaaccatgtgaaagt
tcaaaagagattgagcaagtcggtacaatttctgcaaactctgatgaaactgtaggtaaa
ttgattgctcaagcgatggagaaagtgggcaaagaaggtgtgattaccgttgaagatggt
acaggcttagaagatgcattagatgtggttgaaggtatgcaatttgaccgtggttatctt
tctccgtatttcatcaacaaacctgaaaatggtacggtagagttagaaaatccatatatt
ttattagtagataaaaaaatctctaacattcgtgaagtattagcggtgttagaagcggta
gcaaaagcaggtaaaccattacttattatcgcagaagatattgaaggcgaagcattagca
accttagtggtgaatacgatgcgtggtatcgtgaaagtggctgcggtgaaagcaccaggc
tttggtgatcgccgtaaagcaatgttacaagatattgcaattttaaccgcaggtaccgtg
atttctgaagagatcggtatggagcttgaaaaagcaacccttgaagagctaggtcaagca
aaacgtgtagtgatcagcaaagacaataccactatcattgatggtatcggtgatgaagca
caaattaaaggtcgtattgcccaaattcgccaacaaattgaagattcaacctctgactac
gacaaagagaaattgcaagagcgtgtagcaaaacttgctggcggtgtggcggtaatcaaa
gttggtgctgcaaccgaagtggaaatgaaagagaaaaaagaccgtgttgatgatgccctt
cacgcaactcgtgccgcagtagaagaaggtatcgtccctggtggtggtgtggcattagtg
cgtgcagcaaccaaagtcgctcaaacattaaaaggcgacaacgaagagcaaaatgtgggg
atcaaattagcccttcgtgcaatggaagctccacttcgtcaaatcgtgaccaatgcgggt
gaagaagcgtcagttgtggctcgcaacgtcaaagacggtagcggtaactacggctataat
gcaggtacagagcaatatggcgatatgttagaaatgggtatcttagatccaaccaaagta
actcgttctgcattacagttcgccgcttctatcgcaggcttgatgatcaccactgaatgt
atgatcaccgacctaccaaaagatgaaaaagcagaccttgctgctggtatgggcggtatg
ggtggaatgggtggaatgatgtaa
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