Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_9520
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Entry
WQG_9520 CDS
T02504
Name
(GenBank) Fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto00071
Fatty acid degradation
bto00280
Valine, leucine and isoleucine degradation
bto00310
Lysine degradation
bto00362
Benzoate degradation
bto00380
Tryptophan metabolism
bto00410
beta-Alanine metabolism
bto00640
Propanoate metabolism
bto00650
Butanoate metabolism
bto00907
Pinene, camphor and geraniol degradation
bto00930
Caprolactam degradation
bto01100
Metabolic pathways
bto01110
Biosynthesis of secondary metabolites
bto01120
Microbial metabolism in diverse environments
bto01200
Carbon metabolism
bto01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
WQG_9520
00650 Butanoate metabolism
WQG_9520
09103 Lipid metabolism
00071 Fatty acid degradation
WQG_9520
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
WQG_9520
00310 Lysine degradation
WQG_9520
00380 Tryptophan metabolism
WQG_9520
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
WQG_9520
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
WQG_9520
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
WQG_9520
00930 Caprolactam degradation
WQG_9520
Enzymes [BR:
bto01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
WQG_9520
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
WQG_9520
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
WQG_9520
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Med31
DGOK
Motif
Other DBs
NCBI-ProteinID:
AGH38229
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All DBs
Position
1024951..1027095
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AA seq
714 aa
AA seq
DB search
MELNQTQIEQTQSAFQVEIDRNRIAIVTIDAPNSILNWLPDNFVDALREVIGTVIYQQAR
GVILVSGKPNHFIQGYRPSHLLSLSREQLIAFSNNAQLVMREINTLKMPVIAVIDGECYG
LGLELALACDYRIASESVHTRFSMPQVRSGILPFAGGTQRLTRLIGLPNAMTMLLSGQKI
GAEKALSLGLVDKLIPASNLFETAYSLLLNNQVQKIDHKRPLVRFKHWRKQIESIPLIRN
KYLAMVENRVWYKTFGNYPAVTKLLELLKEPHFKQGLALEQQALAELQATEQARVLINLK
VTEREMKSQYVNLAQVQDVKQVSILGSGYMGAGIAYITANYAQIPVRIKDIHPLGIQKAL
RSCYLLMQKAVNQKRISHGNMIQRMNLITGGERLLAAKSTDFIIEAVYENLELKQQMVRE
SEAYYSENTIFATNTSTFAIRDIASVAKRPENVIGLHYFSPVTKRKMVEIVPHEKTCENT
VATAIHFAIQQGKIPLLVSDSEGFFINRILTPYLLEAIECVVEGEAIEFIDRSLLEFGFK
IGPLAMIDEIGLDVLAKSTPAMVEKLGERFSLPEKVTYLIDNDRKGRKNRRGFYLYDSKG
KRSQEDKSIYHVMETITTNDLEAEQIARRCLLRMINEACWCLQDKVIRSTDEGNVASVFG
VAFPDFRGGIYAYIEKIGASEIVNQLRKHVQIYGSRFEPCEWLIKQAEQAVQNQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatcaaacgcaaattgaacaaacgcaatctgctttccaagtggaaattgac
cgtaataggattgcgattgtgaccattgatgccccaaatagtatattgaattggttgcca
gataattttgtggatgcactgagagaagtgattggtaccgtgatttatcagcaagcgcgt
ggggttattttagtctcaggtaagccaaatcattttattcaaggctatcgaccaagccat
ttattgtcattgagccgagaacaactcattgcattttcaaataatgctcaactggtgatg
cgagaaattaatacgttaaaaatgccagtgattgcagtgattgatggtgaatgctatggc
ttaggtttggagctcgctcttgcgtgtgattatcgtattgccagtgaatcagtgcatact
cgtttttctatgccgcaagtgcgttcgggcattttgccttttgctggcggtacacaacgt
ttaacgcgtttaattggtttgccaaatgccatgacaatgttgctttcagggcagaaaatt
ggggctgagaaagcattaagtttggggctggtcgataaattaattcccgcttctaattta
tttgaaacggcgtattctctcttgctcaacaaccaagtgcaaaaaattgaccataaacga
ccgcttgtccgttttaagcactggcgtaaacagattgagtctattccattgattcgtaat
aaatatcttgccatggtcgagaatcgggtgtggtataaaacttttggtaattatcctgcg
gtaacaaaattattagagctgttaaaagaacctcattttaagcaaggattggcattggag
cagcaggctctggctgaattgcaggctactgagcaagcaagagtgttgatcaatctaaaa
gtcacagagcgggaaatgaaatcgcaatatgtcaatttggcacaagtgcaagatgtaaag
caggtaagtattcttggtagtggctatatgggggctgggattgcgtatattacggcaaac
tatgcccaaattcctgtgcggattaaagatattcatccactaggcattcaaaaggctttg
cgttcttgctatttgctaatgcaaaaagcggtgaatcaaaaacgtatttcgcatggaaat
atgattcagcgaatgaatttaatcacaggcggagagcgtttattagcggctaaatcgacc
gattttattatcgaagccgtctatgaaaatttggaactaaaacagcaaatggtgcgagag
agtgaagcgtattatagcgaaaatacgatttttgccacgaatacttcaacctttgcaatt
cgtgatattgcatcagtggcaaagcgtccagaaaatgtgattggtttgcactattttagc
cctgtgactaaacggaaaatggttgagatagtccctcatgaaaaaacttgtgagaacacc
gttgcaaccgcgattcattttgctattcagcaaggtaaaattccgctactagtttctgat
agtgaaggcttttttataaatcgtattttaacgccctacctattagaggcgattgaatgt
gtggtggaaggggaggcaattgaatttatcgatcgttcactgctggaatttggttttaaa
attgggcctttggcaatgatcgatgaaatcggcttagatgtattggcaaaatctacccct
gcgatggtagaaaagctaggcgaacgatttagtttgccagaaaaagtaacgtatttgatc
gataacgatcgtaaagggcgcaaaaaccgtcgtggtttttatctttacgacagcaaaggt
aaacgtagccaagaagataaaagtatttatcatgtgatggaaactatcacgaccaatgat
cttgaagcggagcagattgcccgtcgttgtttgttgcgtatgattaatgaggcgtgctgg
tgtttgcaagataaggtgattcgtagtaccgatgaaggcaatgttgcttcggtatttggg
gtggcgttccctgattttcgtggcggcatttatgcttatatcgaaaaaattggggcaagt
gagatcgtaaatcagcttcgtaaacatgttcagatttacggtagccgtttcgagccgtgt
gaatggctaatcaaacaggctgaacaagcggtacaaaatcaataa
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