Bifidobacterium thermophilum: D805_0584
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Entry
D805_0584 CDS
T02505
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
btp
Bifidobacterium thermophilum
Pathway
btp03030
DNA replication
btp03430
Mismatch repair
btp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D805_0584 (dnaE)
03430 Mismatch repair
D805_0584 (dnaE)
03440 Homologous recombination
D805_0584 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btp03032
]
D805_0584 (dnaE)
03400 DNA repair and recombination proteins [BR:
btp03400
]
D805_0584 (dnaE)
Enzymes [BR:
btp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D805_0584 (dnaE)
DNA replication proteins [BR:
btp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D805_0584 (dnaE)
DNA repair and recombination proteins [BR:
btp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D805_0584 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MCM10_OB
DUF5487
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
AGH40851
UniProt:
M4RBJ8
LinkDB
All DBs
Position
738213..741785
Genome browser
AA seq
1190 aa
AA seq
DB search
MTDSGNFVQLHNHTHYSLLDGASKIPDLVKRVKELGMPAVGITDHGNMHGAYELWRNAVD
QGIKPIIGIEAYVTPETARQDKTRVSWDTNWVPQPHHERNPDDVSGGGLITHLTLWAEND
EGLVNLIKASSVANLEGRVMRYPRMDKEVLQRYHKGVICSSGCPSGIIQTRLRLGQFDEA
LRAAGEMQDIFGKDNFYIELMDHGLEIERRVTKDLLTIAKKLNAPLLATNDSHYVHEEDR
DAQDAMLCINSGSRLDDPDRFKFDGSGYYIKSAQEMRDLFKELPEACDNTLAIADRCNVI
FDDHEDGAFMPRFDCPEGWDETSLFLKHVDEGLKRRYNGNPPIEVLKQADYECGVICQMQ
FCGYFLVVADYINWAKSHGVMVGPGRGSAAGSMVAYAMGITELDPLKHGLIFERFLNPER
VSLPDIDVDFDPDGRMKVLDYVANKYGHDKVAQCVIYGTIKTKQALKDSARIMGYEFSVG
ERITKALPPSKNGKDASLHDIFDPTSKRYAEAREFRELYDADPDAKRITEEAKGIEGLIR
QTGVHACATIMGSEAITNTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTVIRD
TLTNIRNNGKEPIDYTKIPLDDKPTYELLARGDTLGVFQLDSDGMRSLLKTLKPDNFNDI
SALIALYRPGPMDMDSHNNYAKRKNGLQKITPIHPEVAEPLKEVLGETYGLIVYQEQVQS
AARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFQGMKEHGYSMEAAQAVWDILVPFS
GYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQNERTNKDKTALYLGEARRMGIKVL
PPDVNESRLEYSAVGDVVRFGLGAIRNVGDKAVEDIIAERETARGKYVNFMDFIRRVPVT
ALNRRLVESLIKAGAFDSIDPNRRALYEIHETAIDSVIGLKRKQAEGQFDLFADDDDGGA
DMMGDASVVVPDIEEWDKKTKLNFEREMLGLYVSDHPLSGMTAILANLREMSIAHLIDRA
KTMGDSQQVTIAGLVTNVDRRVSKKGNPWAIVTVEDMESSIQCMFFGKVYENAAAQLAID
EVVQVRGQVEVRDETVSLRATEMQVPSLEADDSRPVVITLPPVALDRDHAMQLGRVLMNH
PGYCPVKLAIMGEKGDAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgacagattccggaaacttcgtccagctgcacaaccatacgcattactcgctgcttgat
ggtgcctcgaaaatcccggatctggtcaagcgcgtcaaggaactcggcatgccggccgtc
ggcatcaccgaccacggcaatatgcacggtgcctacgagctctggcgtaacgccgtagac
caaggcatcaagccgatcatcggcatcgaagcgtatgtgacgccggaaaccgcgcgccaa
gacaaaacccgcgtctcttgggacaccaactgggtgccgcagccgcatcacgaacgcaat
cctgacgacgtctccggcggcggtctgatcacccacctcaccctgtgggcggagaacgac
gaaggcctcgtgaacctcatcaaagcctcgtccgtcgccaatctcgagggtcgcgtcatg
cgctacccgcgtatggacaaggaggtactccagcgttaccacaagggcgtcatctgctcg
tccggatgcccgtcaggcatcatccagacacgcctgcgactcggccaattcgacgaggcc
ttgcgtgccgccggcgaaatgcaggatatcttcggcaaagacaacttctacatcgaactc
atggaccacgggctggaaatcgagcggcgcgtcaccaaagacctgctgaccatcgccaag
aagctgaacgccccgctgctcgccaccaacgactcccactacgtgcatgaggaggaccgc
gatgcgcaggacgcgatgctgtgcatcaactcgggttcccgtctcgacgaccccgaccgg
ttcaaattcgacggttccggctactacatcaaatccgcgcaggagatgcgcgacctgttc
aaagaactgcctgaagcttgcgacaacacgctcgccatcgccgaccggtgcaacgtgatt
ttcgacgaccacgaggacggcgcgttcatgccgcgcttcgactgccccgaaggctgggac
gagacctcactgttcctcaagcatgtcgacgagggcctcaaacgccggtacaacggcaat
ccgccaatcgaagtgctcaaacaggccgattacgaatgtggcgtcatctgccagatgcag
ttctgcggctacttcctcgtcgttgcagactacatcaactgggcgaaatcgcacggcgtg
atggtcggccccggacgtggctccgcagcaggctccatggtcgcctacgcgatgggcatc
accgaactcgacccgctcaagcacggcctgattttcgaacgcttcctcaaccctgaacgc
gtctccctgccggatatcgacgtggacttcgacccggacgggcgtatgaaagtcctcgac
tacgtggccaacaagtacgggcacgacaaagtcgcccaatgcgtgatctacggcaccatc
aaaaccaagcaggcgctcaaggattccgcacgcatcatgggctatgagttctccgtgggc
gagcgcatcaccaaagccctgccgccgagcaagaacggcaaggacgcgagcctgcacgac
atcttcgaccccacgtcgaagcgatatgccgaggctcgcgaattccgcgaactgtatgac
gccgatccggacgccaagcgcatcaccgaggaagccaagggcattgaaggattgatccgc
cagaccggtgtgcacgcctgcgcgacaatcatgggttccgaggcaatcaccaatacctcg
ccgttgttggaacgcaccgacggcaccatcaccacgaccttcgaataccatacgtgcgaa
acactcggcctggtgaagatggatttcctcgggctgtccaacttgacggttattcgcgat
acgctgacgaacatccgcaacaacggcaaagagccgattgactacacgaagattccgctt
gacgacaagccaacctacgagctgctcgcgcggggcgacaccctgggcgtgttccagctt
gattccgacggcatgcgatcgctgctcaagactctgaagcccgataacttcaacgatatt
tccgcattgattgcgttgtaccggccgggcccgatggatatggattcgcataacaactat
gcgaaacgtaagaacggcttgcagaagattacaccgattcatccggaggtggccgagccg
ctcaaagaagtgctcggcgagacttacggcctgatcgtgtaccaggagcaggtgcagtcg
gccgcacgaatcctcgcaggctattcgctgggcaaggcagacgtgctgcgtcgagcgatg
ggcaagaagaagcccgaagtgttggccaaagagaaagtcccgttcttccagggcatgaaa
gaacacgggtattcgatggaagccgcgcaggcggtgtgggatatcctggtcccgttctcc
gggtacgcgttcaacaaggcgcattccgcggcatacggcttgatttcgtactggacggcg
tatctcaagacgcattatccggtcgaattcatggcggcgctgctgcagaacgaacgcacg
aataaggacaagaccgcgctgtacctcggcgaggcccggcgcatgggcatcaaggtgttg
ccgccggatgtcaacgagtcgcggctcgagtattcggcagtcggcgatgtcgtgcgtttc
ggcctgggcgccatccgcaacgtgggcgacaaggcggttgaggatatcatcgccgaacgt
gaaaccgcccgcggcaagtacgtgaatttcatggacttcatccgccgcgtgccagtcacc
gcgttgaaccggcgcctggtggaatcgctgatcaaggcgggcgcgttcgattcgatcgac
ccgaatcgccgggcattgtatgagatccatgaaacggccatcgactcggtgatcgggctc
aaacgcaagcaggcggaagggcaattcgacctgttcgccgatgacgatgacggcggcgcg
gacatgatgggcgacgcctccgtcgtagtgccggacatcgaggaatgggacaagaaaacc
aaactcaatttcgaacgcgaaatgctcggcctgtacgtgtccgaccatccgttgagcggc
atgaccgcgattctggcgaaccttagggagatgtcgattgcgcatctgattgaccgggcg
aagaccatgggcgacagccagcaggtcaccattgccgggctggtcacgaatgtggaccgg
cgcgtgtccaagaagggcaatccgtgggccatcgtgacggtggaggacatggaaagctcc
attcagtgcatgttcttcggcaaggtgtatgagaacgccgccgcacaactggcgattgac
gaggttgtgcaggtgcgcgggcaggtggaagtgcgtgacgagacggtgagcttgcgcgcc
accgaaatgcaggtgccgtcgctggaagctgacgattcgcggcctgtggtgatcacgttg
ccgccggttgcgcttgaccgggaccatgcgatgcagctcgggcgcgtgttgatgaatcat
ccggggtattgcccggtgaagctggcgattatgggtgagaagggcgacgcgcaagtgctg
acctttggcgaccggttccgggtcaagcgcgacacctcgctgttcgcggagatcaagatt
ctcttcgggccgagctgtctgccagccgcctga
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integrated database retrieval system
