Bifidobacterium thermophilum: D805_0662
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Entry
D805_0662 CDS
T02505
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
btp
Bifidobacterium thermophilum
Pathway
btp03030
DNA replication
btp03430
Mismatch repair
btp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D805_0662
03430 Mismatch repair
D805_0662
03440 Homologous recombination
D805_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btp03032
]
D805_0662
03400 DNA repair and recombination proteins [BR:
btp03400
]
D805_0662
Enzymes [BR:
btp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D805_0662
DNA replication proteins [BR:
btp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D805_0662
DNA repair and recombination proteins [BR:
btp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D805_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Isochorismatase
Motif
Other DBs
NCBI-ProteinID:
AGH40929
UniProt:
M4RFH2
LinkDB
All DBs
Position
complement(840307..841077)
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AA seq
256 aa
AA seq
DB search
MTMTYDALIAALEEAPQQSDDTQLGSSWLLGFDTETTGVAAGRDAIVSATLVLRDPQRGH
EGDAEAEWVINPHRRMNPRASAVNGFTDDYLAEHGMEPTDAIDQIARAIAAAQDKNIPLL
AYNAPFDVHMLEGDLNRWKLPQVSERQNPAEPSNGMLVVDPLVIDRAVSKRHGKRTLTLT
TEYYGVVPTGDFHNATADTVAAVDLIKPMSTLYPQVGHLTLGKLMDWQRQAHDAWQTSFN
QWLESRGRTPLHDQWL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacttatgacgcactgattgcggcgttggaggaagcgccacaacaaagcgat
gacacgcagcttggctcttcgtggctgcttggcttcgacaccgaaaccacgggtgttgcg
gcgggacgtgacgccatcgtgtccgcgaccctcgtattgcgcgacccgcagcgcggccat
gaaggcgacgccgaggccgagtgggtgatcaacccgcatcggcggatgaatccaagggcg
agcgccgtcaacggcttcaccgatgactatctcgccgaacacggtatggagccgacggac
gcaatcgaccagatcgcccgggcgattgcggcggcgcaggataaaaacatcccactgctg
gcttataatgccccctttgacgtccatatgctcgaaggcgatctgaatcgctggaagctg
ccccaagtcagcgagcgccaaaatcccgcggaaccgtccaacggcatgctggtggtcgac
ccgctggtcatcgaccgcgcggtatccaagcgccacggcaagcgtaccctgaccttgacc
acggaatattacggtgtcgtccccaccggcgatttccacaacgccacggcggacacggtc
gccgcggtggacctcatcaagccgatgagcaccttgtacccccaggtcgggcatctgacc
ttgggtaagctgatggattggcagcggcaagcgcatgatgcctggcagacatcgttcaat
cagtggctggaaagccgcggccgtaccccgctgcacgatcagtggctgtga
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integrated database retrieval system
