Bifidobacterium thermophilum: D805_1159
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Entry
D805_1159 CDS
T02505
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
btp
Bifidobacterium thermophilum
Pathway
btp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D805_1159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btp03400
]
D805_1159
Enzymes [BR:
btp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D805_1159
DNA repair and recombination proteins [BR:
btp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D805_1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AGH41426
UniProt:
M4RD37
LinkDB
All DBs
Position
complement(1428937..1431171)
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AA seq
744 aa
AA seq
DB search
MTIPDAEQPAFEGLEPRRRRKRTAVKRQRAEHQPIARVVLDVQAAHLGQTFDYLVQDKQD
TQAVPGTLVRVRFGGRRVNGIIWERAERSETPDSSLRYLEQVLGGEILVPARLRDDITLI
AQAYGGTRANIVRLAVPPRVARVEHEQRLAASFSGDAGARQTMCAQRADDLGERLIPDYE
NLRMLGETLSTGGKGAFVVDAMPGAGHWALLFAWMVLRALAAGRGVVAVMPSMRAVDDAV
RQLGSLGLRLFGPRASQQGGYMGDIAVLGASMSPAERYRSYLAVACGQVRCVIGTRAAMY
APIDGNAMFVIVDDTAYQQADGMAPYANARGVLRLRAKAHDGVFVALGNARSPLSQWETD
GGHVAESPVSGYSTSIQPLPAALKERSPWIRWLNREELTRLADPTIGSRVPHTAVAVLSR
ALKTGPVLLSIPQDGIAQTLSCAACHRQARCGKCTGPLEMVPGVSQPRCRWCAAAAVNWT
CPHCHGDRMRVVRVGAAGTVQELRGLFRNIPMVVSSPHQPQGVIADIADAPMLVVATPGA
EPRVRADDGGVGAYRAVAILDAWTSLYSPGIDARIDALDSWMRAIQWCAPRSTGGQAMLI
GEADPLVAQSLMTWNARLLASKELEERAQTGLPPVFASACVWGSRPAVRTMLQGAGLLAG
GDWALLDTQFGPMPAVLGPVPIPPPRTVDARELETMADRVKAVVRVPQSKRAELAERLHR
ESARHVASREPGELRFQLDPKDLI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgactatcccagacgccgaacagcctgcctttgaggggcttgagccgcggcgcagacgc
aagcgcacggcggtgaagcggcagcgtgccgagcatcagccgatcgcgcgcgtcgtactg
gacgtgcaggccgcgcatctgggacagaccttcgattacctcgtacaggataagcaggat
acacaagcggtacccggcaccttggtgcgcgtgcgattcgggggcagacgcgtcaacggc
atcatctgggagcgcgccgaacgcagcgagaccccagactcctcgctgcgatacctcgaa
caggtgctgggcggggaaatccttgttcctgcgaggcttagggacgatatcacgctgatc
gcacaagcgtacggcggcacccgcgccaatatcgtcagactcgctgtgcccccgcgtgtc
gcgcgcgtcgaacacgagcagcggcttgccgcatcgttcagtggggatgctggtgcgcgc
caaacgatgtgtgcgcagcgggccgatgacctgggcgagcggcttatacctgattacgag
aacctgcggatgcttggcgagaccttgtccacagggggcaaaggcgctttcgtggtcgac
gccatgccaggggctgggcattgggcgctgctgttcgcctggatggtgttgcgtgcgctc
gccgccggtcgcggggttgttgcggtgatgccgtcgatgcgtgccgtggacgatgccgtg
cggcaattggggtcgttgggactgcgcctcttcggtccgcgtgcctcgcaacagggcggg
tacatgggagatattgccgtgctcggcgcttcgatgtctccggcggagcgataccggtcc
tatcttgccgtcgcatgcgggcaggtgcgctgcgtcatcggcacacgtgccgccatgtat
gcgccgatcgatggcaacgcgatgttcgtcatcgtcgacgataccgcctaccaacaggcg
gatggcatggcgccgtacgcgaatgcacgcggcgtgctgcggctgagggccaaggcgcat
gacggtgtgttcgtcgcgctcggcaatgcgaggagcccgttgagccagtgggagactgac
ggcggtcatgtcgccgagtcgccggtgagcgggtacagcacttcaatccaacccttgccg
gcagccctcaaggagcgttcgccttggatcaggtggctcaaccgtgaggagcttacgcgg
cttgccgatcccaccatcggttcgcgggtgccgcataccgcggtcgccgtgctgtcgcgg
gcgctgaaaaccggccccgtgctgctgtccattccccaggacggcattgcgcaaacactc
agttgtgcggcgtgtcaccggcaggcgaggtgcggcaagtgtaccgggcctttggaaatg
gtgcccggcgtttcgcagccacgatgccgttggtgtgccgcggcggcggtgaattggaca
tgtccgcactgccatggcgaccgtatgcgtgtcgtgcgggtgggggctgcaggaaccgtg
caggagctgcgcggcctgttcaggaacatccccatggtggtgtcttcgcctcaccagcct
cagggggtgattgccgatatcgccgatgcgccgatgctggtagtggccacccccggagcg
gaaccccgggtgcgtgccgatgacggcggcgtgggagcgtaccgcgcggtggcgattctc
gacgcgtggaccagcctgtattccccaggcattgatgccaggattgatgcgcttgattcg
tggatgcgagccattcaatggtgcgcgccgcgctccacaggcggtcaggcgatgctcatc
ggggaggctgacccattagtcgcccaatccctgatgacttggaatgcgcgcctgcttgct
tccaaagagcttgaagaacgtgcccagaccggattaccaccggtattcgcttcggcatgc
gtatgggggtcgcgccccgcggtccggacgatgctgcaaggcgccggattgcttgccgga
ggcgattgggcgctgctggatacccagttcggtccgatgccggccgtgcttggcccggta
ccgattccgccgccgcgaacggttgacgcgcgtgagctggaaaccatggcggaccgggtc
aaagccgtcgtgcgtgtcccgcaatccaagcgcgctgaactcgccgagcgtctgcaccgg
gaaagcgcccggcatgttgcctcgcgcgaaccgggggaattgcgtttccaactcgatccg
aaagacctgatctga
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