Bifidobacterium thermophilum: D805_1306
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Entry
D805_1306 CDS
T02505
Name
(GenBank) putative very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
btp
Bifidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
btp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btp03400
]
D805_1306
DNA repair and recombination proteins [BR:
btp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
D805_1306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF3603
Motif
Other DBs
NCBI-ProteinID:
AGH41573
UniProt:
M4RG86
LinkDB
All DBs
Position
complement(1613429..1613881)
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AA seq
150 aa
AA seq
DB search
MSHIRGKDTSIEVLVRSYLFRHGLRFRKNDRRYPGHPDVVLPKWRTIVFVNGCFWHAHAN
CKAFSRPKSNVEFWSVKLMRNGERDRLQHAQLVADGWRVIVVWECELAKPVREARLARLY
DQITAMPDGQPGIIDDTIPAGGKGEPGAIV
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacattcgcggcaaggacacaagcatcgaagtgctcgtccgcagctatctgttc
aggcacgggctgcgcttccgcaagaacgaccggcgctatccgggacacccggatgtggtg
ctacccaagtggcgcacgattgtgttcgtcaacggttgcttctggcatgctcacgccaat
tgcaaagccttctcccgtcccaaatccaatgtcgaattctggtcagtgaaactcatgcgc
aacggtgaacgcgaccgactgcaacatgcccagctcgtcgccgacgggtggcgtgtgatc
gtggtatgggaatgcgagctggcgaaaccggtgcgagaggcgcgtctcgctaggttgtac
gaccagatcaccgcgatgccggacgggcaacccggcatcatcgacgacacgattcccgcc
ggcggcaagggtgagcctggcgccatcgtgtga
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integrated database retrieval system
