Bifidobacterium thermophilum: D805_1616
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Entry
D805_1616 CDS
T02505
Name
(GenBank) ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
btp
Bifidobacterium thermophilum
Pathway
btp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D805_1616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btp02000
]
D805_1616
Transporters [BR:
btp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
D805_1616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AGH41883
UniProt:
M4RH35
LinkDB
All DBs
Position
complement(1995579..1996841)
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AA seq
420 aa
AA seq
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MNTNNWIEPDWNNTDTAAANSRRHGRRHGVAAIAAAVAVAGVLAVSGCGASGTSTSGAKA
AQAVQKLGKSEGKVSILAWPGYVEDGSDDPDIDWVSDFEKETGCEVTSKTYGTSDEAYNL
VKSSDAYDVVAASGDLTLRLINAGLVQPVNTGLIPNYKDVYSFLKNRDFNTVDGKSYGVP
HGYGANLLMYNKADFSEAPTSWDVVFDKAKASKFKGKVTAYDSPIYIADAAIYLMKHKPS
LNIKNPYALDETQLKAAVDLLKEQNANVGEYWSDSLKLAQAFQSGDTVVGTGWQVIYNQM
DSSKFGITSPEEGVTGWSDTWMISSKTKHTNCAYQWLNYIDSPKANAQATEYFGEAPANK
NACQYATDSKFCDIYHAGDKDFEKKIWYWNTPISQCIDGRKNVKCTDYTEWTKAWQEIKG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaacaactggatcgaacccgattggaacaacacggacaccgccgccgcgaac
agccgacgtcacggccggcgacacggggtggccgcgatcgcagcggcggtagcagtggcg
ggcgtactcgccgtcagcggttgcggtgcctccggaacgtcgacgtcaggcgcaaaagcc
gcgcaagccgtgcaaaaactcggcaaatcggaaggcaaggtatcgattctcgcctggccc
ggatacgtggaagatggctctgacgacccggacatcgactgggtgagcgacttcgagaag
gaaaccggatgcgaagtcacctccaaaacctacggaaccagcgatgaagcctacaatctg
gtgaaaagctccgatgcctacgatgtggtcgccgcatccggcgatctgactttgaggctc
atcaacgccggactcgtccagccggtgaacaccggtctcatccccaactacaaggacgtc
tactcgttccttaagaaccgtgatttcaacacagtggacggcaaatcctacggtgttcct
cacgggtacggcgctaatctcctgatgtacaacaaggctgacttcagcgaggcgccaacc
tcgtgggatgtcgtcttcgataaagccaaggcaagcaagttcaagggcaaagtcactgcc
tatgattccccgatctatatcgctgacgccgcgatctacttgatgaagcacaagccgtca
ctgaacatcaagaacccgtacgcgcttgacgagacccagctgaaagccgccgtcgacctg
ctcaaggagcagaacgcgaacgtgggcgaatactggtcggattccctcaaactcgcccag
gcgttccaaagcggcgacaccgtggtgggtaccggatggcaggtgatttacaaccagatg
gattcctcgaaattcggcatcaccagtcccgaggaaggcgtgaccggctggtcggacacg
tggatgatcagctcgaagaccaagcacacgaactgcgcctatcagtggctcaactacatc
gacagtccaaaggcgaacgcccaggcgaccgaatacttcggcgaggcgccggcgaacaag
aacgcatgccagtatgcaaccgacagcaagttctgcgacatctaccacgccggtgacaag
gacttcgagaagaagatctggtactggaacactccgatctcgcagtgtatcgacggccgc
aagaacgtcaagtgcaccgattacacggagtggaccaaggcatggcaggaaatcaagggg
tga
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