KEGG   Bartonella tribocorum CIP 105476: BT_2694
Entry
BT_2694           CDS       T00636                                 
Symbol
rho
Name
(GenBank) transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
btr  Bartonella tribocorum CIP 105476
Pathway
btr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BT_2694 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btr03021]
    BT_2694 (rho)
   03019 Messenger RNA biogenesis [BR:btr03019]
    BT_2694 (rho)
Transcription machinery [BR:btr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BT_2694 (rho)
Messenger RNA biogenesis [BR:btr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BT_2694 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB NACHT S1CSD-TOTE-2
Other DBs
NCBI-ProteinID: CAK02641
UniProt: A9IZY3
LinkDB
Position
complement(2617239..2618504)
AA seq 421 aa
MQKMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLALQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPAQIQSFSLKTGDTIEGPIRSPKEGERYFALLKIN
TINFEKPEKIRYKIHFDNLTPLYSNERFQMEIQDPTEKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEELLVARQDLHKIFVLRRILAPMNVTDAIEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaaaaaatgaaactacaagaacttaaaagcaaaaatcccgttgaacttgtttctttt
gctgaaacattagaagttgaaaatgcctcccttatgcgcaaacaagaattaatgtttgcg
attttgaaaaaacttgctctacaagacgtagaaattataggagaaggtgttgttgaagtt
ttacaagatggatttggatttttgcgttctgctgacgctaattatcttcctggacctgat
gatatttatctttcacctgcacaaatccagtcattttctttaaaaacaggggataccatt
gaaggtcctatacggagcccaaaagaaggggaacgttattttgctcttcttaaaattaat
acaattaatttcgaaaaacctgagaagattcgctacaaaattcactttgataatcttact
cctctttattcaaatgaacgtttccaaatggaaatacaagatcctacagagaaggatatg
tcatcgcgtgtgattgatctgatatctccgttgggaaaaggacaaagaggattaattgtc
gcaccacctcggacaggaaagacagttctcctacaaaatattgctcattctattaccact
aatcatcctgaatgttatcttattgttcttttgattgatgaacgaccagaagaagttaca
gatatgcaacgttcagtaaaaggagaggtcgtttcttctacttttgatgaacctgcaata
cgtcacgtacaggtggcagaaatggtcattgaaaaagctaaacgcctcgttgaatatgga
cgcgatgttgttattcttcttgattcgattacacgtcttgggcgtgcgtataataccgtt
gttccttcttcaggtaaagttttgacagggggtgttgatgcaaatgctttgcagcgtcca
aagcgtttttttggtgctgcacgtaatattgaggaaggtggctctttaactattattgca
acggctttgattgatacaggtagccgtatggatgaggttatttttgaagaatttaaagga
acaggtaattccgagatcgttcttgatcgaaaagttgctgataagcgtattttccctgct
atggatattttaaagtcaggaacgcgtaaggaagagcttttggtcgcacgacaagattta
cacaaaatttttgttcttcgtcgtattttagcacctatgaatgtaacagatgcaattgag
tttttgattgataaattaaagcaaacaaaaaataatagcgaattttttgattcaatgaat
acttag

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