Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_11570
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Entry
F544_11570 CDS
T03019
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btra03016
]
F544_11570
Enzymes [BR:
btra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
F544_11570
Transfer RNA biogenesis [BR:
btra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F544_11570
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
TPR_HPS5_insect
Motif
Other DBs
NCBI-ProteinID:
AHG86385
UniProt:
W0R7V8
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All DBs
Position
complement(1244637..1245767)
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AA seq
376 aa
AA seq
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MHPIPYQWIETDQQLAEICHNARMQPVVTLDTEFIRIRTYYAKLGLIQLFDGNHVALIDP
LAINDFTPFVQLLADTKVLKVLHACSEDLEVFHHYFQQMPVPMLDTQIMAGFAGLGTSVG
FAKLVQHYLNTELDKGASRTDWLARPLSEKQLQYAAADVWYLLPIYHQLATALAQTPWEN
AVQEECRSVCTKVSLPVDLDKAYKDISNAWQLNAQQLSVLHLLAKWRIEEAIKRDLALNF
IVKEQSLWRIAKEQPKHTSALLEFMHPNEVRIHGKKLLRIVEQSKHLAQEDYPDEIMRIV
DFIGYKPSLQALQRRLSEILPENLPIELLASKRQLNQLFGWQRKGENTEKLPELLIGWRR
AFGLQLLETLRKIVVN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctataccatatcaatggattgaaacggatcaacaacttgctgaaatttgtcat
aacgcacgcatgcagccggttgtgactctagatacagaattcattcgtattcgtacttat
tatgcaaaattagggcttattcagcttttcgatggaaatcatgttgcgcttattgacccg
ctagcaattaatgatttcacgccatttgttcagctacttgctgacacaaaagtcttaaaa
gtacttcatgcttgtagtgaagatcttgaggtttttcaccattattttcagcaaatgcct
gtgccaatgctagatacgcaaataatggctgggtttgcaggcctcgggacttcagtagga
tttgctaaattagtgcaacattatctaaatactgaattagataaaggtgcctctcgtacg
gattggttggctcgaccattaagcgagaaacaacttcagtatgcagctgcagatgtttgg
tatttattgcccatttatcatcaactcgcaacagcgcttgcgcaaaccccttgggaaaat
gcggttcaagaagaatgccgtagtgtttgtactaaagtgagtctgccggtagatttggat
aaagcctataaggatattagcaatgcttggcaactcaatgctcagcaactctcagtgtta
cacttattagcaaaatggcgtattgaagaggcaattaagcgagatttagctctcaatttt
attgtgaaagaacagagtttatggcgtatagccaaagagcaaccaaaacatacatcggca
ttactggaatttatgcatccaaatgaagtgcgaattcacggcaagaagctattacgcatt
gttgagcaaagtaaacatttagcacaagaagattatcctgatgaaattatgcgcattgtg
gatttcattgggtataaaccgagtcttcaggcgttacaacgtcgcttatccgaaattttg
cctgaaaatttaccgatagaattacttgccagcaaacgacaattgaatcaactttttggc
tggcaacggaaaggagaaaatacagaaaaattaccggaattattaattggttggcggcga
gcatttggactacaattgttagaaacattgagaaagattgttgttaattga
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