Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_11640
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Entry
F544_11640 CDS
T03019
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btra03032
]
F544_11640
03036 Chromosome and associated proteins [BR:
btra03036
]
F544_11640
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_11640
DNA replication proteins [BR:
btra03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F544_11640
Chromosome and associated proteins [BR:
btra03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
F544_11640
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
F544_11640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
THDPS_N_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHG86392
UniProt:
W0R7F8
LinkDB
All DBs
Position
complement(1250624..1250905)
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELIENLVAKNPSIQSKSVDECVKEILEQMIAALEKGSRIEVRGFGSFSLHYRQSRV
GRNPKTGDSVKLSSKYVPHFKAGKELKERVDLS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagaattgattgagaatttagtagctaaaaatccttctattcaatccaaa
tctgttgatgaatgcgttaaagaaattttagagcaaatgattgctgctctagaaaagggt
tctcgcattgaagtaagaggatttggtagcttttcactgcactatcgtcaatctagagtg
ggacgtaaccctaaaacaggtgatagtgtaaaattatcttcaaaatatgttcctcacttt
aaagcagggaaagaacttaaagaacgtgtagatttgtcgtaa
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