Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_12860
Help
Entry
F544_12860 CDS
T03019
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03030
DNA replication
btra03410
Base excision repair
btra03420
Nucleotide excision repair
btra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F544_12860
03410 Base excision repair
F544_12860
03420 Nucleotide excision repair
F544_12860
03440 Homologous recombination
F544_12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btra03032
]
F544_12860
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_12860
Enzymes [BR:
btra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F544_12860
DNA replication proteins [BR:
btra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F544_12860
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F544_12860
NER (nucleotide excision repair)
GGR (global genome repair) factors
F544_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHG86514
UniProt:
W0R5U4
LinkDB
All DBs
Position
complement(1410058..1412895)
Genome browser
AA seq
945 aa
AA seq
DB search
MATIAANPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVAPSHIAV
VFDAKGKTFRDELYEQYKSHRPPMPDELRAQIQPLHAMIKALGIPLISIEGVEADDVIGT
LAVQAAKDGKDVLISTGDKDMAQLVNEHIMLINTMNNTLLDRDGVVEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMREIYANLDKVATLSFRGAKTFAPKLAAEK
AMADLSYTLATIKTDVELALSHDQLIPQPQNRDVLMELFGRYEFKRWLNEVMGDSNPVTQ
GSKEKIANKYSVTQAVVSEEKFAKITLDRSAYQCVNNAELFEQWLEKLQCAKLIAVDTET
DSLEAVSANLVGISFALENGEACYIPLQHQGIQATQSDLFADDEPQIGLLPNQLDLNETL
AQLKAILESPQIQKIGQNIKYDLTIFAQHGIELQGVAFDTMLESYTLNSTGRHNMDDLAD
RYLGHKTISFEELAGKGKNQLTFDQIELDKATEYAAEDADITMKLHQVLSSELAKEPSLK
KLFSEIEMPLVSVLSRVERNGVLIDPQRLLTQSREIEQRLSALEMAVHREADEVFNLAST
RQLQEVLFDKLGLPVIKKTPKGAPSTNEEVLEELAQMGHAVPKLIIEHRGLSKLKSTYTD
KLPQMINQKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIPREGYVIL
AADYSQIELRIMAHLANDQMMIQAFAQGQDIHRATASEIFGVSLAEVSSEQRRSAKAINF
GLIYGMSAFGLSNQLGIGRKEAQEYIDKYFLRYPAVQQFMLDIREKAAEKGYVETLFGRR
LYLPEINSSNQIRRKAAERLAINAPMQGTAADIIKVAMIGIDKAIQGCDDIFMIMQVHDE
LVFEVRADRVEHYTALIKAEMEKAIVLKVPLIAEVGIGLNWDEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattgcagcaaacccactcgttctcgttgatggttcatcttatctttatcgt
gcttttcatgctttccctcctttaacgaataaacaaggtgaacctaccggtgcaatgtac
ggtgtattgaatatgttaaaaagtctgattgcacaggttgcgccaagccatattgcggta
gtgtttgatgctaaaggaaagacctttcgcgatgagctgtacgaacagtataaatcgcac
cgaccgcctatgccagatgaactgcgtgcccaaattcagccattacacgctatgattaaa
gcgctgggtatccctctcatttctattgaaggcgtggaagcagatgatgtgattgggacg
ctagcggtacaagcggcaaaagatggtaaggatgtactaatcagcaccggcgataaagat
atggcgcagttggtgaatgaacatattatgctgattaacaccatgaataatacattgctc
gatcgtgatggcgtggttgaaaaatatggtattccgccggagcttattattgattatctc
gctctgctaggcgatagctcagataatattcctggggtaaaaggtgtaggcgagaaaaca
gccattgcgttattgcaaggtattggttcaatgcgagaaatttatgcgaacctagataaa
gtggcaacgcttagctttcgtggggcaaaaacatttgcgcctaaattagcggcagaaaag
gcgatggcagatctctcttatacccttgcaaccattaaaaccgatgttgaattagcactt
agccatgatcagctcattcctcaaccacaaaatcgcgatgtgctaatggaactattcgga
cgttacgaatttaaacgttggctcaatgaagtgatgggagacagtaatccggttactcaa
ggcagcaaggagaaaatagcgaacaagtattccgtaacgcaagcggtggtttctgaagaa
aaatttgcaaaaataacattagatcgtagcgcttaccaatgtgttaataatgcagaatta
tttgaacaatggttagaaaaactacagtgtgcgaaattaattgccgtagatactgaaacc
gatagcttagaagccgtatctgccaatttagttggtatttcttttgcgcttgaaaatggt
gaggcgtgttatattcctttgcaacatcagggcatacaagcgacacagagtgatttattt
gcagatgatgagccacaaataggactattacctaatcagcttgatttaaacgagacgctc
gcccaattgaaagctattctagaaagccctcagatccaaaaaattggtcagaatattaaa
tatgatttgaccatttttgcccagcacggtattgaactacaaggcgttgcttttgatact
atgcttgaatcttatacgcttaatagtactgggcgacacaatatggatgatcttgctgat
cgttatttagggcataaaacgatttcatttgaagagttagctggtaaaggcaaaaatcag
ctcacatttgaccaaattgaactggataaagcaacagaatatgcggctgaagatgcggat
attacgatgaagctgcatcaagttctctcaagcgagttggcaaaagaaccaagtctgaaa
aagttgttctcagaaatagaaatgcctctagtttctgtgttatcacgagtagaacgtaat
ggcgtattaattgatccacaacgtttacttacccaatccagagaaattgaacagcgtctt
tcggcgctggaaatggcagtgcatcgtgaggcagatgaggtatttaatctcgcttcaacc
aggcagttacaagaggttttatttgataaactgggattgccagtgattaagaaaacgcca
aaaggagcaccatcaacgaatgaggaagtgttagaagaacttgctcaaatggggcatgct
gtgccgaaattgattattgaacatcgaggtttaagtaagttgaaatcaacttatactgat
aaattgccacagatgattaatcaaaaaacaggtagagttcatacctcttatcatcaagcg
gtaactgcaacagggcgactttcttcaagtgatccaaacttgcaaaatattcctatccgt
aatgaagagggcagacgtattcgccaagcttttattcctcgtgaaggttatgtcatactg
gcggccgactattcgcaaattgaattacggattatggcgcatcttgctaatgaccaaatg
atgattcaagcctttgctcaagggcaagatattcaccgagcgacagcttctgaaattttt
ggtgtctctttggctgaagtgagcagtgaacagcgccgtagtgctaaggcgattaacttt
ggcttgatttatggcatgtctgcttttggcttgtctaaccagcttggcattgggcgtaaa
gaggctcaagaatacatagacaaatatttcctgcgttatcctgcagttcaacaatttatg
cttgatattcgagaaaaagcagcagagaaaggttatgtggaaacactgtttgggcgtcgt
ttatatttgccagagattaattccagtaatcaaattcgccgtaaagcggcggaacgttta
gcgattaacgcaccaatgcagggaacggcagcagatattattaaagtcgcaatgattggt
attgataaagcaattcaaggttgtgatgatatttttatgattatgcaagtgcatgatgaa
ttggtttttgaagtcagagcggatcgagtagagcactatacggctttaattaaagcagaa
atggaaaaagcgattgtgctgaaagtgccacttattgcagaggtagggattgggctgaat
tgggatgaggctcattaa
DBGET
integrated database retrieval system
