Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_13660
Help
Entry
F544_13660 CDS
T03019
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F544_13660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btra03019
]
F544_13660
03016 Transfer RNA biogenesis [BR:
btra03016
]
F544_13660
Enzymes [BR:
btra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F544_13660
Messenger RNA biogenesis [BR:
btra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F544_13660
Transfer RNA biogenesis [BR:
btra03016
]
Prokaryotic type
tRNA degradation factors
F544_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
aRib
S1_2
UPF0181
KH_SLS1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AHG86594
UniProt:
W0R622
LinkDB
All DBs
Position
complement(1501601..1503739)
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPIVRQFKYGQHTVTLETGAIGRQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLT
VDYQERTYAAGRIPGGFFKREGRPSEGETLVARLIDRPVRPLFPEGFFNEIQVIATVMSV
NPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQLVLNPTTSEQKISRLDLVVA
GTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNT
DLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIFTAL
ESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTER
DAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEE
FPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQA
IPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKIAAT
DGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDTRVE
RVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcctattgtaagacaatttaaatacggtcagcataccgtaaccttggaaacg
ggggctattggtcgtcaagcaactgctgccgtcatggcaagtatggacgacaccacggtt
ttcgtgactgtggttgcgaaaaaagacgtaaaagaaggtcaagatttctttcctttaacg
gttgattatcaagaacgtacctatgcagcaggtcgtatccctggtggtttctttaaacgt
gaaggcagaccatcagaaggtgaaaccttagttgctcgtttgattgaccgtcctgttcgc
ccacttttccctgaaggtttctttaacgaaatccaagtcattgcaaccgtaatgtcagtg
aatccacaaattagcccagatttagtggcaatgatcggtgcatcggcagcgctttcttta
tcaggtgtaccatttaatggcccaatcggtgcagctcgtgttggttttattaacgatcaa
ttagtattaaacccaacgactagcgaacaaaaaatcagccgcttagatttagtggttgca
ggtacagataaagccgtattgatggtggaatcagaagcagatattttaactgaagaacaa
atgcttgcagcggtggtgtttggtcatgaacagcaacaagtggtaattgaaaatatcaaa
gagtttgttaaagaagcaggcaaaccacgttgggattgggttgcaccagaaccaaatacc
gatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcgtaccgtatc
gttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaacaattgcagca
atcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttcacggcatta
gaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgacggtcgtact
gttgataccgtgcgtgccttagatatttgcactggcgtattaccacgcacccacggttct
gcgcttttcactcgtggtgaaacccaagcattagcagtagcaacattgggtacagagcgt
gatgcacaaatcattgatgaattaaccggcgaaaaatctgaccgtttcttattccactat
aacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaacgccgtgaa
attggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaactgcggaagag
ttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttcttcttcaatg
gcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatcaaagcggcg
gttgctggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagtactttccgat
attttaggtgatgaagaccatttaggcgatatggactttaaagttgcgggaactcgcact
ggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaaattatgcgt
attgctttaaaccaagcgaaaggtgcaagaatgcacattttaggtgtgatggaacaagca
attccggcacctcgtgcagatatttctgactatgcgccacgcattcacaccatgaagatc
gatccgaagaaaatcaaagatgtgattggtaaaggcggtgcaacaattcgtgctttaacc
gaagagaccaatacttcaatcgatattgatgatgacggtaccgtgaaaattgcggcaact
gacggtaatgcagcgaaagcggtaatggctcgcattgaagagatcgttgccgaagtggaa
gtaaaccaaatctataacggtaaagtaacccgtgtggtggacttcggtgcattcgtttca
attttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatactcgtgtagaa
cgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtggtggaaattgac
cgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaaacagaaact
gttgagcaagaaaattctcaatcagatatcgttgaataa
DBGET
integrated database retrieval system
