Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_14070
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Entry
F544_14070 CDS
T03019
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btra03016
]
F544_14070
Enzymes [BR:
btra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
F544_14070
Transfer RNA biogenesis [BR:
btra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F544_14070
Prokaryotic type
F544_14070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHG86635
UniProt:
W0R8J3
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All DBs
Position
complement(1536261..1537049)
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AA seq
262 aa
AA seq
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MMKIALGIEYDGSRYFGWQRQQEVASIQQCLEEALSKIANAPCEVFCAGRTDAGVHGTGQ
VVHFETNIERPLKSWCFGTNAHLPEDIAVKWAVEVPEDFHARFSATARRYRYIIFNHRLR
SAILPKGISHYYHDLDAEKMHQAGQFLLGENDFSSFRAAQCQSHTPWRNVHHLNVWRQGH
YIIVDIQANAFVHHMVRNIVGSLIEVGQGRQPIEWIKWLLEQKDRTLAAPTAKAEGLYLV
DVSYPEQFSIPKKTLGPLFLAD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaattgcactcggaattgaatatgatggtagccgctattttggttggcaacgc
cagcaagaagtggcttcaatacagcaatgtttggaagaagcgttaagcaaaattgctaat
gcaccttgcgaagttttttgtgcagggcgaactgatgcaggcgttcacggcacggggcaa
gtggtgcattttgaaacgaatatagaacgtccactcaaaagttggtgctttggcacaaat
gcacatttgcctgaggatattgcggtaaaatgggcagtggaagtacctgaggattttcat
gctcgctttagtgcgacagctcgtcgttatcgctatattatttttaatcaccgcttgcgt
agtgctattttacctaaaggaatttcacattattatcatgacttagatgcagagaaaatg
caccaagccggacaatttttactcggggaaaatgatttctctagttttcgtgcagcgcaa
tgtcaatcacatacaccatggcgtaatgtgcatcatcttaatgtttggcgacaaggacat
tatattattgtggatattcaagcgaatgcttttgtgcatcatatggtgcgtaatattgtc
ggcagtttgattgaagttgggcagggacgacaaccaatagaatggattaaatggctgctt
gaacaaaaagatcgtacattggctgccccaactgccaaggcagaaggattatatctagtg
gatgtgagttatcctgaacaattttccatacctaaaaaaactttagggcctttattttta
gccgattaa
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