Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_15590
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Entry
F544_15590 CDS
T03019
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F544_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_15590
Enzymes [BR:
btra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F544_15590
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F544_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
PIF1
DEAD
SH3_13
nSTAND3
AAA
AAA_16
PhoH
Zeta_toxin
NPHP3_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AHG86787
UniProt:
W0R8L4
LinkDB
All DBs
Position
1714451..1716409
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AA seq
652 aa
AA seq
DB search
MLKLLAELKQENLISELNYQFAKWIDNKQQAYDYSPTQQNLTLFLAALLSFHVMQGHSCL
RLNSSIIENPFGLKNYQYKRDYFNEILQKIERIPALEWQSYLAEHIAFSDNPEHVAPMLF
QHNRLYFYRYWQAEHRIARKMQQTVQTHTPDSAENSLNQAILAQFFIHQSAKIDWQKVAV
ATALAKKFCLISGGPGTGKTYTVAILLAALQLKQLKLGLTPLNIALAAPTGKAAARLKES
ITHSLLSLVQIPDELKQLLPNSAKTLHSLLGIRPNRDLPHYNADNPLHVDLLVVDEASMI
DLFVMEKLFNALKPTTRLILLGDKDQLASVEAGNAMSELGELLPLGYSKQHCDYLQCVTG
YELFSSNSQVPAVCDSLCHLRESRRFSEYSGIGYLAAQINAKQAGNSWQSFANSAFSDLQ
LITYPAMTNAPEKTQWQQQCVKLVVQQAVQLYRPYLSLVKQRQQSPASISVAQIFAAFSQ
VRFLSALRVSELGVENLNQEIAGALRQCHLIEFNQSRESYIGKPILITENAAQLHIFSGD
IGLMLPDEQGKLRIYFDTNENGQYLNISPSRVPNYEPAYVMTVHKSQGSEFAHTLMVMPH
SHSPVLSKELLYTAVTRAKEKFTLFASERIWKNAVRTDIQRQSGLREQILAN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactacttgccgaactcaaacaagagaacctaatttctgaacttaattatcaa
tttgccaaatggattgataacaaacaacaagcttacgactactctcccactcagcaaaac
ttaacgttattcttagccgcattactttcttttcatgtgatgcaaggacatagttgcctt
cgcctcaattcaagcataattgaaaacccttttgggctaaagaattaccaatacaagcgg
gactatttcaacgaaattttgcaaaaaattgaacgaatcccagcgcttgaatggcaatct
tacttagctgaacatatcgcatttagcgataatcctgagcatgttgccccgatgctgttc
cagcataatcgactctatttctaccgctattggcaagcagaacaccgaattgctcggaaa
atgcaacaaactgtgcaaacacatactccagacagcgcagagaacagcttaaatcaagcg
attctggctcaattttttattcaccaatccgcaaaaattgattggcaaaaagtggccgtt
gccacagcattagccaaaaaattctgcttaatttcaggtggtcctggtacaggaaaaacc
tataccgtagcaatcttgctagcggcattacaacttaaacagctcaaattaggtctaaca
ccacttaatattgccctcgctgcgccaacaggcaaagcagcagcacgtttaaaagaatcc
attacgcatagtttgctgtcattagttcaaattccagatgaattaaaacaacttctacca
aacagcgccaaaacactgcatagtttattaggtattcgaccaaaccgtgatttaccacac
tataacgcggataacccactgcatgttgatctattagtggttgatgaagcctctatgatt
gatctcttcgtcatggaaaaactatttaacgccttaaagcccacaactcgcctgatcctc
ttaggcgataaagatcagcttgcctctgttgaagccggcaatgcaatgagcgaattaggc
gaattacttcccctcggctatagcaaacagcattgtgattatctgcaatgtgtaacaggc
tatgagctattttccagcaatagccaagtacccgcagtatgcgacagcctatgtcactta
cgagaaagtcgtcgttttagcgaatattctggtataggctatcttgccgcccaaattaat
gccaaacaagcgggcaattcttggcaaagttttgcaaatagtgcttttagcgatctgcaa
ctcattacctatcctgctatgacaaacgccccagaaaagacacaatggcaacagcagtgt
gtaaaactcgtggtgcaacaggcagtgcaactttatcgtccttatcttagtttggtcaaa
caacgtcagcaatcaccagctagcattagcgtggcgcaaatttttgcagcattctcacaa
gtgcgtttcttatctgcattacgcgttagcgaactgggcgttgagaacttaaatcaagag
atagccggagctctgcggcaatgccatttaatcgaatttaaccaaagccgtgaaagctat
attggtaaaccgattttgatcacggaaaatgcggctcaactacatatttttagcggcgat
atcggcttaatgttaccagatgagcaaggcaaactgcgcatctatttcgataccaatgaa
aatgggcaatatcttaatatttccccaagtcgagtgcctaattatgaaccggcttatgtg
atgactgttcataaatctcaaggttctgaatttgcacacacattaatggtgatgcctcac
agtcactcccctgtattgagcaaagagctgctttataccgcagtcactcgtgcaaaagaa
aaatttacgctgtttgcgagtgagcgcatttggaaaaatgcagtaagaacggatattcaa
cgccaaagtgggctacgcgaacaaattctcgcaaactag
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