Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_16530
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Entry
F544_16530 CDS
T03019
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F544_16530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_16530
Enzymes [BR:
btra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F544_16530
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F544_16530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_30
AAA_12
AAA_25
GlutR_dimer
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHG86881
UniProt:
W0R7X7
LinkDB
All DBs
Position
1800019..1803660
Genome browser
AA seq
1213 aa
AA seq
DB search
MLKFPYSVFWGITMNILEPLSLPLNQSVLIEASAGTGKTYTMANLYLRLILGIGCEPLTT
EQILVVTFTKAATQELRDRIRTKLGNVAKWFQDVESEDSKAAFAQDPFLFELYQAIEPNL
NTARLRLKIAEREMDLASIFTIDSFSQKMLFQYAFDSGMRFDIDLQPDEKNLLARLSEES
WRELFYSMSLAESELVRKHLKTPAQALKIVQASLSGSLPALSAHQSVVQSRLADFAQQKS
LAISQLKQFWQENSAQISALVLGELDKKYPPKTPKSLSRRSYTPARTSQYLAELDLWAKT
HSTTFPANWEKFTQSFIANKAEKGADPLVSPLLEQAEQLAQHYLQQFSEKQEYNILIFRF
LTHLRKKLSAYKQSHREKSFNDITDFLHTALQGENGDRFAQAIRTQFRFAMIDEFQDTNR
QQYEIFQRIFIQGVENQGFIMIGDPKQSIYKFRHADIFSYLNAAKQVDLCVTMDKNWRSV
PQIVSDINALFSFPENGKSPFIYQGIQFQAIQAKEPDETLQGASQSNCYLLPEFDVQHAA
EYCAYHIQQQLKLAAQGKLFLQKNGEKHPLAAKDITILVRGKNEAELIKHELWQRKIQAI
YLSARDSVYESAEAQELLFILQACVNPYHQGNLLTAVGTSLWSLAAHEIFQLKHDEQRWE
SYVEQFIHYHRIWQQQGILPMLHKIFLEQGIIQRLSSQENAERRITDLLHLAELLQEAML
ECRNESALIQWFQQQLNEPNGQSDEQKLRLESEQALIKIVTIHGSKGLEYPVVWLPFIAK
ASKPFSEIGAFGKKNTPTTYHDENHTLRWAFSPLSEQEQQQLTKEEFAEDLRLLYVALTR
AKHQLNLILPEQFDENWNSVSYLLSNGEIGLGGEEIQQPTEQLLAQKQLRCQIQPFSPVL
DDTWQATNEAPTILQPKVFQTQIHSNRQLTSFSALHAQHERLQNRELNQPLVISDDAQDY
DRSQDYLAADDSNEESKLFYSPFSFPHNTKVGNVLHKVFEEWHFAEPLTSAQIQEKICQP
LDLSEEWLEPLQLWLNQIIYTPFADNLRLADFASDKRLNEWQFYLRLRNEKALPQLNQLL
KAESRLAKNLPDFHFKQLDGFVRGFVDMVVQVAGKFYIIDYKSNYLGKLPQDYCAEKIEK
AMGQYRYDLQYLLYTLALHRYLNSRLGKDYSYEKHFGGVAYLFLRGMNGELNSGVYFDRP
SQTLIEKLDQLFD
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattcccctattctgtattttggggcataaccatgaatattcttgagccactc
tctcttcctctaaatcaatccgtattaattgaagcctctgcaggtacagggaaaacctat
accatggcaaatctctatctacgtttaattttaggtataggatgcgagcctttaaccaca
gaacaaattttggttgtcacctttaccaaagcagcaactcaagagctaagagatcgtatt
cgaactaaattaggcaatgtagctaagtggtttcaagatgtggaaagtgaagactcaaaa
gcagcatttgcgcaagatccttttttattcgagctctatcaagccattgagccaaacctt
aataccgctcgcttacgcttaaaaattgctgagcgagaaatggatcttgccagtattttt
actattgatagcttcagccaaaaaatgctgtttcagtatgcttttgattctggaatgcgc
tttgatattgatttacaacctgatgaaaaaaatttattagcgcgcttaagcgaagagagc
tggcgagagttattttattcgatgtcattagccgaaagcgaattggtacgtaaacacctc
aaaacccctgcacaggctttaaaaatcgtacaggcttccctttccggctcattaccagca
ttatccgcacaccaatccgtcgttcaaagccggctggccgactttgctcaacaaaaaagc
ctcgctattagccaattaaaacaattctggcaagaaaatagcgcccaaatcagcgcccta
gttttaggtgaattggataaaaaatacccgccaaaaacgccaaaatctctcagccgccgt
agttacacacctgctcgtacttcacaatatcttgccgaacttgatttatgggcaaaaacg
catagtacgaccttccccgcaaattgggaaaaattcacccaatcttttatcgcaaataaa
gcagaaaaaggggctgatccgttagtctcgccactccttgagcaggcagagcaattagct
caacattacttacagcagtttagtgagaagcaggaatataacattctaatttttcgtttt
ttaacccacctacgcaagaaactctcggcctataaacaatcgcaccgtgaaaaaagcttt
aacgacataaccgatttcttacacaccgcgctacaaggtgaaaatggtgatcgctttgcc
caagctattcgtacacaattccgttttgcgatgatcgatgagttccaagatactaaccgc
caacagtatgaaattttccagcgcatttttattcaaggggtagaaaatcaaggttttatc
atgattggcgacccaaaacagtcgatctataaattccgccatgctgatattttctcgtat
ctcaatgcagctaaacaggtagatctatgcgtaaccatggataaaaactggcgctcagtg
ccacaaattgttagcgatattaatgcgctgtttagttttccggaaaatggcaaaagtccg
tttatttatcaaggtattcaattccaagcaatacaggctaaagaaccagatgaaaccttg
cagggagcaagccaaagcaactgctatttgttacctgaatttgatgtacagcacgccgcc
gaatattgtgcttaccacatccaacaacagctcaaacttgctgcacaaggcaaattattt
ttgcaaaaaaatggcgagaaacatccgcttgcagccaaagacatcacaattttagttcga
ggtaaaaacgaggctgaattgataaaacatgagctatggcaacgaaaaattcaggcaatc
tatctctctgcgcgtgatagtgtgtatgaatctgccgaagcacaagaattgctgtttatt
ttgcaagcctgcgttaatccatatcaccaaggcaatttattaaccgcagtaggcacctca
ctttggagtcttgctgcccacgaaatttttcagttaaagcatgatgaacaacgttgggaa
agctatgttgagcaatttattcattatcaccgcatctggcagcagcaaggtattttaccg
atgctccataaaatcttcctagaacaaggcattattcagcgtctaagtagtcaagaaaat
gctgagcgacgcattaccgatttacttcaccttgccgagctactacaagaggcaatgctc
gaatgccgtaatgaaagcgcattaattcaatggtttcagcagcaacttaatgaacccaat
gggcaatctgatgaacaaaaattacgtttagaaagcgaacaagcgttgataaaaattgtg
acaattcacggctcaaaaggcttagaatacccagttgtttggctaccatttattgcaaaa
gcaagcaagccattcagtgaaataggcgcctttggtaaaaagaatacacccacaacttac
catgatgaaaaccatacattgcgttgggctttttcgcctctttctgaacaagaacaacaa
caacttacgaaagaagaatttgcagaagatttacgtttgctttatgttgctttaacccga
gcaaaacaccaattaaacctgattttacctgagcaattcgacgaaaattggaatagtgta
agctacctgcttagtaatggcgaaattggtttgggcggtgaagagattcaacaacccacc
gagcaacttttggctcaaaagcaactccgctgccaaatacagccatttagccctgtacta
gatgatacttggcaagccacaaatgaagcgccaacaatccttcagccaaaagtttttcaa
acccagatccattcaaataggcagctcaccagttttagtgcactacatgctcaacatgag
cgtttgcaaaatagggagctaaatcaaccgcttgttatcagcgatgacgcacaagattac
gatcgcagccaagactatttagcagcggatgatagcaacgaggaaagtaaactgttctac
agccctttcagcttcccgcataatactaaagttggtaatgtattgcataaagtatttgaa
gaatggcactttgccgagccactgacaagcgctcaaattcaggaaaaaatttgccaaccg
ctagacttaagcgaagaatggcttgagcctctacaactgtggctcaatcaaattatctat
acaccttttgccgataatcttcgcctagctgattttgctagtgataaacgcttaaatgaa
tggcaattttatctgcgtttacgtaatgaaaaagcgttgccacaacttaatcagcttttg
aaagcagaaagccgtttagccaaaaatctaccagattttcattttaaacagctagatggc
tttgtacgcggttttgttgatatggtggtacaagtggcaggcaaattctatattatcgac
tacaaatcaaactatctaggtaaactgccacaagattattgtgctgaaaaaatcgaaaaa
gcgatggggcaatatcgctatgacctacaatatctgctctatacacttgcactacaccgt
tacttgaattctcggcttggtaaagattatagttatgaaaagcattttggcggggtagct
tacctgtttttacggggaatgaatggtgagctaaacagcggtgtttattttgaccgacct
agtcaaaccctaatagaaaaactcgatcaactatttgattaa
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