Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_1870
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Entry
F544_1870 CDS
T03019
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F544_1870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btra03400
]
F544_1870
Enzymes [BR:
btra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F544_1870
DNA repair and recombination proteins [BR:
btra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F544_1870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHG85422
UniProt:
W0R4M8
LinkDB
All DBs
Position
174628..177915
Genome browser
AA seq
1095 aa
AA seq
DB search
MLKVYYANQLRDHKDLLVGILENDPNPDPFSQETILVQSIGMAQWLQMEIAQKMGISANI
AFPFPTSFVWQQYRTLFPELPKENIFSPSSTVWRFMRLIPKLLSHPSLSPLARYLAEGDQ
LKLYQLATKIADIFDQYLVYRPQWLIHWEQGENQHILNAITQNSSLKRQAHAELENAIQW
QGMLWNALIADIRQDTAEEIFHTSHRAYLQHRYFEKLANLSDLELKKLPKRVFVFGISSL
PPSQLAVLKKLSEYITVHLFFTNPSQEYWGDQQDERMLEKLALKQQISSEEMQEYAKGNP
LLAVWGKQGKEFFNLLEELEPLINEPRLFDDFTGKYSLLANVKRAILYNQPEFDETLNEH
EIPSLQIHVCHSKMREVEVLHNRLLAMFEQDPQLSPKDIIVMSPDIDSYAPYINAVFARF
QRSDNRYIPFSLSDQKISHVDPVVASFLNLLSFKEKTFSVEEILDLLNVAAIRTKYQISE
EQLLQLQEWITSVGIRAGLQQDNPSWQNYNSWENGIARLLLGTALKEENNPWQNVLGFDE
SYGLNADLTGNFAHFLENLTAWHMQLQTAHTAKQWQAMLLNLLTQFYSEEHEQIDSVLVL
QHSIKAVMEPILQTEFNEPLATEIILQLFESRFHDTRSSLNFMVGRVNFCTLLPMRAIPF
KVVCLLGMNEGEFPRQQMSNSFDLMQYAHQKGDRARRDDDRYLFLESLLSAQQVFYISYI
GQSLTDNQEKLPSILVSQLLDYLSSQQSDSQVQQYLYRHPMTVFSPNNFIDGAISYDVEW
LQAKHQPQAINDFSEPIARDFVDLPNEIELDDLISYVQDPVKFFFNRQLGIRFEQHEYAP
EPHEVFELSKLDEYQLLNKLVEIKPCDHAQYIENTKLKGKLPHGYFGELATQDMNEKVHM
LQIALADYLGKEKNLLEIDYPQGIRLPNGETYQIRVQGYIQNCFEQQQIVQWRVGRLRDK
DLIRAWLNYLFLIVTQENNVPFRFYFFDKKVQCLRFTTLDKSQAADLIQIYLQDYFANFG
QLTTALTSDLKGYFKTLSEGDENELDLTLLEKCLNDSSNPYWYRVVAQTAVPDFNAIHQR
TLRWFELMIRSQEIQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagtctattatgcgaaccaattaagggatcataaggatctgcttgtcggtatt
ttagagaatgatccaaatccagatcctttttcgcaagaaacaatcttggtacaaagtatt
ggtatggcgcagtggctgcaaatggagattgcgcagaaaatgggtatcagtgctaatatc
gcatttcctttcccaactagctttgtttggcagcaatatcgcacactctttccagagcta
cctaaagaaaatattttctcgccttcaagtacagtttggcggtttatgcgtttgatccct
aagctactttctcacccctctctgagtccattggctcgctatttggcagaaggcgatcag
ctaaagctataccagttggccactaaaattgcagatattttcgatcagtatcttgtttat
cgcccgcagtggttaattcactgggaacaaggcgaaaatcagcatatcttgaatgcaata
actcaaaattcttctcttaaaagacaagctcatgcagagctggaaaatgcgattcaatgg
caaggaatgttgtggaatgccttgattgcagatattcgccaagatacagcagaagagata
tttcatacttcacaccgtgcttatttgcaacatcgctattttgagaaattggctaattta
agcgatctagaactgaaaaaattaccgaaacgggtttttgtttttggcatatcttcttta
ccgccaagtcagcttgccgtattaaaaaagttgagtgaatatattactgtacatctgttt
ttcactaatccgagccaagagtattggggtgatcagcaagatgaacgtatgctggaaaaa
ctcgcgctaaaacagcaaatttcatcagaagaaatgcaggaatatgcgaaaggtaatcca
ttattggctgtttggggtaagcaaggcaaagagttttttaacttactagaagagcttgaa
cctttgattaatgagccacgcttatttgatgattttacgggcaaatactccttgctggct
aatgttaagcgggcaattttatataatcagcctgaatttgatgagacgctcaatgagcac
gaaataccttctttacaaattcacgtttgtcatagcaaaatgcgtgaagtagaagtgtta
cataatcgcttgttggctatgttcgagcaagatcctcagctatcgccaaaagatatcatt
gtgatgtctccagatattgatagttatgcgccttatatcaatgcggtatttgcacgtttt
caacgcagtgataatcgctatattccgtttagcttatccgatcaaaaaataagccatgtt
gatcctgtcgtggcaagttttttaaatttgctttcatttaaagagaaaacatttagtgta
gaagaaattttagatttgctaaatgtagcggctattcgtacgaaataccaaatcagtgag
gaacagctacttcaactacaagaatggatcacctctgttggcattcgagcaggcttacag
caagataacccctcttggcaaaattacaattcatgggaaaatggcatcgctcgtttgttg
cttggtacagcattaaaagaagaaaataacccatggcaaaatgtacttggttttgatgaa
agttatggattaaatgctgatttaactggtaattttgcacattttttagaaaatctgacc
gcttggcatatgcaattacaaacggcacataccgctaagcagtggcaagcaatgttactt
aatttgctcacgcaattttatagtgaagagcatgagcagatcgacagtgtattagttttg
cagcattcgattaaagcagtgatggagccgatcttacaaacagagttcaatgaacctctg
gctacagagattatcttgcagctgtttgaaagtcgttttcatgatacgcgtagcagcctt
aattttatggttggtcgtgtcaatttctgtactttattaccaatgcgtgctattccattc
aaagtagtttgcttgcttgggatgaatgaaggggaatttccgcgccagcaaatgagcaat
agttttgatttgatgcaatatgcccatcaaaaaggagatcgtgccagacgagatgacgat
cgctacctgtttttggaatcattactctctgcacagcaggtcttctatattagttatatc
ggacaatcactcaccgataatcaagaaaaattgccttctattttagtgtcacagttatta
gattatctctccagccaacagagtgattctcaagttcagcagtacttgtatcggcaccca
atgacagtatttagtccaaataattttattgatggtgcaatttcttatgatgttgaatgg
ttacaggcgaaacatcaaccacaggcaataaatgatttttctgagccgatagcgcgagac
ttcgtagatttaccaaatgaaattgaattggatgatctgatttcttatgttcaagatccg
gttaagtttttctttaataggcagcttgggattcgcttcgaacaacatgaatatgcgcca
gagccacatgaagtgtttgagctttcgaagcttgatgagtatcagcttttgaataagtta
gttgaaattaaaccttgtgaccacgcacaatatattgaaaatactaagctaaaaggtaag
ttaccccatgggtattttggcgaattggcaacgcaggatatgaatgaaaaagtccatatg
ttacaaatcgccttggcggattatttaggtaaagaaaaaaatttacttgaaatcgattat
ccgcaagggattcgattaccaaatggtgaaacttatcaaattcgtgtgcagggttatatt
caaaactgctttgaacagcaacaaattgtacaatggcgagtaggaagactgcgggataaa
gatcttattagagcatggttaaattatttgtttctaatcgttacccaagaaaacaatgtg
ccatttcgtttttatttttttgataaaaaagtgcaatgtttacgctttactacgcttgat
aaatcgcaagcggctgacttaattcaaatttacttacaagattattttgcaaattttggc
caattaactaccgctttaaccagcgatttaaaaggctattttaaaactttatcggaaggc
gatgaaaacgagcttgatttaacgctgttggaaaaatgtctaaatgacagcagtaatcct
tattggtatagagttgtagctcaaactgctgtgccagattttaatgctatccatcaacgt
accctacgatggtttgagttgatgatacggtctcaggagattcaatga
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