Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_22660
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Entry
F544_22660 CDS
T03019
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra00300
Lysine biosynthesis
btra00470
D-Amino acid metabolism
btra01100
Metabolic pathways
btra01110
Biosynthesis of secondary metabolites
btra01120
Microbial metabolism in diverse environments
btra01230
Biosynthesis of amino acids
Module
btra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F544_22660
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F544_22660
Enzymes [BR:
btra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F544_22660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
BT_3535-like
Motif
Other DBs
NCBI-ProteinID:
AHG87494
UniProt:
W0R8P3
LinkDB
All DBs
Position
complement(2399984..2401234)
Genome browser
AA seq
416 aa
AA seq
DB search
MDYFNYKNQQLFAEEVAVADIIEQYGTPAYIYSRATLERHWHAFNNALGNHPHLICFAVK
SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSHSEIQRALEVGIR
CFNVESIAELHRINQIAGEIGKTAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDVARD
VYRLAKTLPNVQIVGMDCHIGSQLTELQPFLDATDRLIILMEQLKEDGIELHHLDLGGGL
GVPYTNETPPHPSEYATALLAKLKDYPNLEIILEPGRAITANAGILVTKVEYLKQNEDRN
FAIVDTGMNDMIRPALYEAYMQIIEVDLSLNREKAVYDVVGPICETSDFLGKQRELMIAE
GDLIAVRSAGAYGATMSSTYNSRPQAVEVMVDGADAHLIKQRAEFADLWRLERLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattattttaactacaaaaaccaacaactttttgcagaagaagttgctgtggcagac
attattgaacaatatggtacgccagcctatatttactctcgtgcaacccttgagcgccat
tggcatgcctttaacaacgcgttaggcaatcatcctcacttaatctgctttgcggtgaaa
tcaaactctaatattgcgttattaaatgtgatggctaggcttggttcaggctttgatatt
gtttcacaaggtgaattagaaagggtacttgctgcaggaggagatgccagtaaagtggtg
ttttctggcgtagcaaaatcgcatagcgaaatacaacgtgcgttagaagttggtattcgt
tgttttaatgtggaaagtattgctgaattgcatcgtattaaccaaattgccggtgaaata
ggaaaaacagccccaatctctttgcgcgtgaatcctgatgttgatgcgcatactcacccc
tatatttccactggtttaaaagagaataaatttggcgtaagtgttgatgttgcgcgtgat
gtctatcgtttagctaaaaccttgccgaatgtgcaaatcgtaggaatggattgccatatt
ggttcacaattaaccgagttacaaccgtttttagatgcgacagatcgtttaattatatta
atggaacaattgaaagaagacggtattgagctacatcacctagacttgggagggggatta
ggtgtgccttataccaatgaaactcctccgcatccaagcgaatatgcaacagcattgctg
gcaaaattaaaggattatccaaatttagaaatcattttagaaccagggcgagcgattaca
gcaaatgctgggattttggtgactaaagtcgaatacctaaaacagaatgaagatcgtaat
tttgccattgtcgatactggtatgaatgatatgattcgccctgctttatacgaagcttat
atgcaaattattgaagttgatttatcacttaaccgagaaaaagcggtgtacgatgtcgtt
gggccaatctgtgaaacctcggatttcttaggtaaacagcgtgaactgatgatcgctgaa
ggcgatttaattgccgtgcgttctgctggtgcttatggcgcaacaatgtcttcaacttac
aacagccgtccacaggccgtggaggttatggtggatggtgcagatgcccatttaattaaa
cagcgggcagagtttgccgatttatggcgtttagagagattattgccataa
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