Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_22840
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Entry
F544_22840 CDS
T03019
Name
(GenBank) HTH-type transcriptional regulator
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btra03000
]
F544_22840
Transcription factors [BR:
btra03000
]
Prokaryotic type
Helix-turn-helix
IclR family
F544_22840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_69
HVO_A0261_N
TrmB
Rrf2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHG87512
LinkDB
All DBs
Position
complement(2414112..2414948)
Genome browser
AA seq
278 aa
AA seq
DB search
MKNTSGIKIHKIYKIGARMEEKQSGNQSLIRGLKLLTLLGNFPNGCPLAKLAELSELNKS
TVHRLLQGLQSEGFVRPAATAGSYRLSTKCLSLGQKTLASMNIINIAAPYLEQVNLNLGE
TVNFSKREGWHSILIYKLEPTVGMMRTRAYIGQHQQLYCSAMGKLYLAYDADETALQHYW
HINEANIQQLTCYTITEKSKMAIELEEIRQLGFAMDREENELGVCCIAVPVFNHLGQIEY
ALSVSASTHRLNKDTQENFLKELQIAAQGISKELGYNC
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatacaagcggtataaaaattcacaaaatttacaaaataggagcaagaatggaa
gaaaagcagagtggtaatcagagtcttattcgggggttgaagttgctaactttattagga
aatttcccgaatggttgcccgctggcaaaattggctgaattatcggagttaaataaaagt
acggtacatcgcttattacagggattacaaagcgaaggatttgtacgaccggcagcaaca
gcaggaagttatcgattgagtactaaatgcttaagcttaggacaaaaaacactggcttca
atgaatattattaatattgctgcgccttatttggaacaggtaaatttaaatttgggtgaa
acggtgaatttctctaagcgagaaggttggcattctattttgatttataagcttgaacca
acagttggtatgatgcgtacgcgagcttatattgggcaacatcagcaactttattgttca
gcgatggggaaactttatttggcgtatgatgctgatgaaaccgctttacaacattattgg
catatcaatgaggcaaatattcagcaactgacttgttatactattactgagaagtctaag
atggcgatagaacttgaagaaattcggcaacttggctttgcgatggatcgtgaagagaat
gaattaggtgtatgttgcattgctgtacctgtttttaaccatttagggcagattgaatat
gccctgtcagtttccgcatctactcatcgtctgaataaagacacgcaggaaaactttttg
aaagagctacaaattgcggcacaaggaatttcaaaagagttgggatataactgctaa
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