Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_4440
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Entry
F544_4440 CDS
T03019
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btra03009
]
F544_4440
Enzymes [BR:
btra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
F544_4440
Ribosome biogenesis [BR:
btra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F544_4440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
PCMT
Methyltransf_11
MTS
RrnaAD
Methyltransf_ANTKMT
Methyltransf_12
Methyltransf_4
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Methyltransf_15
Ubie_methyltran
Methyltransf_23
DOT1
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AHG85676
LinkDB
All DBs
Position
complement(458750..460066)
Genome browser
AA seq
438 aa
AA seq
DB search
MALFYSDKLAKKSPKTTACPVFQIQNLDYQGLGVAKLNGKTWFIENALPNERVRAKVLEE
KRQYGRAQAVEILQKSAKRQSPFCPVYSQCGGCQMQHIPLEMQRQTKQNSLFQRLQKLQA
EAIDFQPMIVGNGEGYRRRARLSIALQKNQLAIGFRQAGSQDIIHINQCQVLEPELSALL
PKIQILLQQWENKKQLGHLELVQADNGIALLLRHIGAIAPRDQQKLRDFAEHHQLMLFVM
YEQDLIEQWRGEAPYYEIQGLKLHFSIRDFIQVNRELNPKMVETAINWLDLSGSERVLDL
FCGMGNFTLPIAQQAQQVVGVEGVEAMVLQARQNAQTSGLKNAEFYQTNLDQPFIEQAWA
KEAFDKVLLDPARHGALFCLDHLCDLNPSRIVYVSCNPATLVRDAQKLIEQGYHIVKSAM
IDMFPHTGHLESVTLFAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttttattccgacaaattggcaaaaaaatcgcccaaaaccaccgcttgccca
gtatttcaaattcaaaatttagattatcaaggcttaggtgttgccaaactaaatggcaaa
acgtggtttattgaaaatgcgctaccaaatgagcgcgtaagagccaaagtattagaagaa
aaacgccagtatggccgcgcacaagcggtcgaaattttgcaaaaatctgcaaaacgccaa
tcccctttctgcccagtttattcgcagtgtggcggttgtcaaatgcagcatattccattg
gagatgcaacgccaaacaaaacaaaactcactgtttcagcgtctgcaaaaattacaagct
gaagccattgactttcagcccatgattgttggcaatggcgaaggttatcgccggcgcgca
agattaagcattgctttacaaaaaaatcaactggctattggctttcgccaagctggctca
caagatattatccacatcaaccaatgccaagtgttagagcccgagctttcagctttactg
ccgaagatccaaatactgctacagcaatgggaaaataaaaaacaacttgggcacttagag
cttgtgcaagcggataatggcattgctctgttattacgccacattggtgcaattgcacct
cgtgatcagcaaaaactaagagattttgccgaacatcatcaattaatgctatttgtcatg
tatgaacaagatctgattgaacagtggcggggtgaagctccttattacgaaattcaaggc
ttaaagctgcatttttcgattcgagattttattcaagttaatcgtgaattaaaccctaaa
atggtcgaaacagcgataaattggcttgatttgtcaggatcagaacgcgttttggatctc
ttttgtggaatggggaattttaccttaccaattgctcaacaagctcagcaagtagttggt
gtagaaggcgttgaggcaatggtacttcaggctcgccaaaatgcccagacaagcgggtta
aaaaatgcagaattctaccaaactaatctcgaccagccttttattgaacaagcgtgggca
aaagaggcatttgataaagtgctgcttgatcccgctcgtcatggtgcattattctgctta
gatcatctgtgcgatctcaaccccagccgcatcgtttatgtttcttgtaatcccgcaact
ttggttcgcgatgcccagaaactgattgaacaaggctatcacattgtaaaatcagcgatg
attgatatgttccctcatactgggcatttagaaagtgttacactttttgctcgttaa
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