Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_7830
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Entry
F544_7830 CDS
T03019
Name
(GenBank) Nickel-binding periplasmic protein nikA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F544_7830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btra02000
]
F544_7830
Transporters [BR:
btra02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F544_7830
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHG86014
UniProt:
W0R4C8
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All DBs
Position
complement(849018..850586)
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AA seq
522 aa
AA seq
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MQKILFPFVFSSLLLSACDQQTAQTTIVQAESQTASPTQNNELTLATIVAPWEIGNLEPN
QSGVIFQRMNLAETLVEADQQGNLIPALATEWHSDESGKIWTFTLRENVSFHNGKPLDVQ
AVVNSLNIAKSKPGVLANAFINEIRANNDKLEIELSKAFEPFPSFLTHYSTIILAPESYN
NEGNVVELIGTGAFKPVQIQAPQKLSAQRFDAYWGEKPQLLQANYLASSRSETRSLMAQS
DASSLVFNLDTASVERLKNDPNLQVISGSIARTIQLKMDVAKPFFNDIAIRQALSQAINR
KAIAEQVLKIEDGIADQLLPKGFEEWRVQSEIPAVNIAKIKQNLTAYGYEFDAQGNLTKD
GKPFSFTLRTFSDRPELPIIATILQAQWKQIGVNVNVSVGNFSEIPAGHQDGSLEMALYA
FNYGKTLDPFAIIAQDIANGGSDWGVMNWQNSELDNAVKALETERNAEKAKALKQRISQI
INDELPIIPVVYYQQNVVAHKGVQNITLDPFERRFFLEKLAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattctattcccatttgtattttctagcctacttttaagcgcttgcgatcaa
caaacggcacaaactaccatcgtgcaagcagaatcacaaaccgcttcaccaacacaaaat
aatgagcttacacttgcaactattgtcgccccttgggaaatcggcaaccttgagccgaac
cagtcgggcgtcatttttcagcgtatgaacttagcggaaacattggtagaggcggatcaa
caaggtaaccttattccagcgcttgccaccgaatggcacagcgatgagtcaggcaaaatc
tggacatttaccttgcgtgaaaatgtgtcattccacaatggcaaaccgcttgatgtgcaa
gcggtggtaaatagcctaaacattgcaaaatctaaacctggtgtgctagcgaatgctttc
atcaacgaaattcgtgccaacaatgacaagctagaaattgagctaagcaaagccttcgag
ccatttccatcatttttaacccactactctacgattattcttgcccctgaaagctataac
aatgaaggcaatgtcgttgaacttatcggcacaggtgcatttaaacccgtgcaaattcaa
gcaccgcaaaaactctctgctcaacgttttgatgcctattggggagaaaaaccacagcta
ttacaagccaactatttagcgagcagccgtagtgaaactcgttcactgatggcacaaagc
gatgcttcatcattagtgtttaatcttgatacggcaagtgtggaacgtttaaaaaacgat
ccgaatttgcaagtcattagtggctctattgcacgtaccattcaattaaaaatggacgtg
gcaaagcccttttttaacgatattgcgattcgccaagccctatcacaagcgattaaccgt
aaagcgattgccgagcaagttttaaaaattgaagatggcattgccgatcagcttctgccg
aaaggctttgaggaatggcgagttcaaagcgaaatcccagcagtaaatattgcaaaaatt
aagcaaaatctcaccgcttacgggtatgaatttgatgcacaaggcaatctcaccaaagat
ggtaagccgtttagctttaccttgcgcaccttttctgaccgcccagaactgccgattatc
gccactattttgcaagcacaatggaaacaaattggggtgaatgtgaatgtttccgttggg
aatttcagcgaaatccccgcaggccatcaagatggtagcctagaaatggcactctatgcc
tttaactacggtaaaaccttagatccctttgccattattgcccaagatattgccaatggc
ggtagcgattggggcgtaatgaactggcaaaatagtgagctggataacgcagtaaaagca
ttagaaaccgaacgcaatgccgaaaaagccaaagcgttaaaacagcgaatcagccaaatt
atcaatgatgaattgccgattattccagtggtgtattatcagcaaaatgtggtggcacat
aaaggtgtacaaaacatcacgcttgatccctttgagagacgtttctttttagaaaaattg
gcgaaatag
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