Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_9550
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Entry
F544_9550 CDS
T03019
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
btra
Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
btra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F544_9550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btra03019
]
F544_9550
03009 Ribosome biogenesis [BR:
btra03009
]
F544_9550
03036 Chromosome and associated proteins [BR:
btra03036
]
F544_9550
Enzymes [BR:
btra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
F544_9550
Messenger RNA biogenesis [BR:
btra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F544_9550
Ribosome biogenesis [BR:
btra03009
]
Eukaryotic type
90S particles
RNase
F544_9550
Prokaryotic type
rRNA processing factors
F544_9550
Chromosome and associated proteins [BR:
btra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
F544_9550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHG86184
UniProt:
W0R4Z1
LinkDB
All DBs
Position
1012850..1013521
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AA seq
223 aa
AA seq
DB search
MQLERLQKKIGYQFANVDYLKQALTHRSAAAKNNERLEFLGDSILNFTIGKALFEKFPKS
NEGELSRMRAALVKEQTLAIIARQFDLGEYLKLGAGEMKSGGHRRESILSDCVEAIIAAI
FLDSGMDKAMERTIEWYKALLAQMQPGEAQKDPKTRLQEFLQSRKMPLPEYEVIDIKGEA
HNQTFKVSCKVQNLDEIFVGVGTSRRKAEQNAAEQVIGKLGVK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaacgattacagaaaaaaattggctatcaattcgccaatgtggattaccta
aaacaagccttaactcaccgtagtgccgctgcgaaaaataatgagcgtttagagttccta
ggcgattccattttgaattttacgatcggtaaagccttatttgaaaaatttcctaaatcg
aatgagggggaattaagccggatgcgagctgcattagtgaaggagcagacgcttgccatc
attgctcgtcaatttgatttgggcgagtatctcaaattaggtgcaggtgaaatgaaaagc
ggaggacaccgccgagaatcgattctttctgactgcgttgaagcgatcattgcggcgatt
ttccttgatagtggcatggataaagcgatggagcgaaccattgaatggtataaggctctg
ctggctcaaatgcaacccggcgaagcgcaaaaagatcctaaaactcgtctgcaagagttt
ttacagagcagaaaaatgccactcccagaatatgaagtgattgatattaaaggcgaggcg
cacaatcaaacgtttaaagtcagctgtaaagtgcagaatttagatgagatatttgtgggc
gttgggacaagccgccgtaaagcagaacagaatgcggcggagcaggtgatagggaagtta
ggggtaaaatag
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