Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_1010
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Entry
F542_1010 CDS
T03017
Name
(GenBank) Catabolite gene activator protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre02020
Two-component system
btre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F542_1010
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F542_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btre03000
]
F542_1010
Transcription factors [BR:
btre03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
F542_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
HTH_23
HTH_11
MarR_2
MarR
HTH_29
HTH_28
GntR
HTH_24
HTH_ParB
RPA_C
TrmB
RepL
bAvd
Sigma70_r4
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AHG80819
UniProt:
A0A4V7I765
LinkDB
All DBs
Position
complement(104676..105224)
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AA seq
182 aa
AA seq
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MINAGDSAESLFYIVKGAVSVFVKDDDGKEMLLTNLGQGEFVGELLLFEEKAQQRTAWVR
TKCDCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRMTSRQVSNLAFLDVTGRIAQTL
LNLAKLPDAMTHPQGMQIKITRQEIGQMVGCSRETVGRVLKLLEDEGLISAHGKTIVVYG
TR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgattaacgctggggattcagcagaatctctattctatattgtgaaaggtgccgtttcc
gtttttgtaaaagatgatgacggcaaagaaatgctactgacaaacttaggacaaggcgag
tttgtgggtgagctactcttgtttgaagaaaaagctcaacaacgcaccgcttgggtacgc
actaaatgtgattgcgaaattgctgaaatttcttataaaaaattcaaacagctggtgcat
ttaaatccagatattttgatgtatctctctgctcaaatggcacggcgcttacgtatgact
tctcgccaagtgagcaatttagccttccttgatgttacgggtagaattgcacaaacgcta
ctgaatttagcgaaattgcctgatgcaatgacacatccacaaggaatgcaaattaaaatt
acccgacaagaaattggacaaatggtaggatgctcacgcgaaacggttggtcgagtgttg
aaactattagaagacgaaggcttaatttctgctcatggtaaaactattgtagtgtatggc
acacgttaa
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