Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_11420
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Entry
F542_11420 CDS
T03017
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btre03016
]
F542_11420
Enzymes [BR:
btre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F542_11420
Transfer RNA biogenesis [BR:
btre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F542_11420
Prokaryotic type
F542_11420
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHG81860
UniProt:
A0A4V7I9W5
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All DBs
Position
complement(1222797..1223687)
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AA seq
296 aa
AA seq
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MLDKPQGVSSNDIMQKVKRLFNANKAGHTGALDPLATGMLPICLGEATKFSQFLLDSDKR
YLVCAKLGERTDTSDADGQVVQTRSVNVSEHDILANLDAFRGDILQVPTMFSALKHNGKP
LYEYARAGINVVREARPITIFELKFIEYQAPFLTLEVHCSKGTYIRTLIDDLGEALGCGA
HVTMLRRIAVADYPFERMMTIENLQNLAENQALATLDKLLLPIDSAVSRLPRINLDELQT
KAVGFGQRLKFANEQHILGAARLFSADGTFLGVAEIREDNVIRPSRMVVIDKDNDV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgttagataaaccgcagggtgttagttctaacgatattatgcaaaaggtcaaacggcta
tttaatgccaataaagctgggcatacaggcgcgcttgaccctttagcaacagggatgttg
cctatctgcttaggagaagccactaagttttcgcagttcttattagattcggataaacgt
tatttagtttgcgcaaaactcggggagcgtacagatacgagtgatgcagatgggcaagtt
gtgcaaacgcggagcgttaatgtctctgagcatgatattttagcgaatttagatgcattt
cgtggtgatattctgcaagtaccaacgatgttttctgctttaaaacataatggtaaaccc
ttatatgaatacgctcgtgcggggattaatgtagtgcgtgaagcacgtcctattaccatt
tttgagctgaaatttattgaatatcaagcaccatttttgacccttgaagtacattgttca
aaaggaacttatattcgcaccttaattgatgatttaggtgaggctttaggctgtggggca
cacgtgacgatgttacgccgtattgcggttgcagattatccatttgagagaatgatgacc
attgagaatttgcaaaatttagccgaaaatcaagcgcttgccacgttagataagctgctt
ttgccgatagatagcgcggtgagccgtttgccgagaataaatttagatgagttgcaaact
aaggctgttggctttggtcaaaggctgaagtttgctaatgagcagcatattctgggtgca
gcgcgcttattttcagcagatggaacctttttaggtgtagctgaaattcgcgaagataat
gtgattcgaccaagccgaatggtagtgatagacaaggataatgatgtataa
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