Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_13010
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Entry
F542_13010 CDS
T03017
Name
(GenBank) oligopeptide transporter, periplasmic-binding protein, OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F542_13010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btre02000
]
F542_13010
Transporters [BR:
btre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F542_13010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHG82019
UniProt:
A0A4V7IAK0
LinkDB
All DBs
Position
complement(1402949..1404502)
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AA seq
517 aa
AA seq
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MNIGKAFGLQALHFAKYCAKRSACLCLTVGLLASCEKPEPLELIPPPERSDTLLSRALLN
STLQLDPHFVTNVAESALVRDLFVGLTAFDQYGNVIPAVARHSFSEDGKTWLFILDDNAV
WSNGEVVSADDFVASWQRLLDPQSASPWANYLVDMHIDNAKEILTKEMPLFELGVRALSY
NTLQIELEEPNFQLPAMLAHVALLPSYKGQKPENELISNGAYVLEGIEKQRVTLQARETH
TAFQHVIYQRVGEKQSLQGFDLVENPPIDYPNEAFRLPRLCSYFYEFNFSDPVIGQKSVR
QAIRSMLVTPEIGKGLGIPLHSILPTTMLEGQDHLPFTGSAESILAQTELDYTNLPPFTL
TFGKDELQQLVANRFVRQLTQSDLFRIRLQAMDFAELEELHQQQNFQIMPREICAAYTDP
LVFLAQFHSQSMDNHSGYGNEKVDSWLDELQSRPLTQEQRDERIMKIVQQINEDVAILPL
FQYQRKIALNPSIIGIHKNNDSGVVYSKDLSRQTKDE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgggaaggcttttgggctacaagcgctccattttgcaaaatattgtgcaaaa
cggagcgcttgcctctgcttaactgtggggttattagcaagctgtgaaaagccagaaccg
ttagaacttattccacctccagaaagaagcgatacattactaagtcgtgcattattgaat
agtacgttacagcttgatccgcattttgtgaccaatgtagcagaaagtgcgttagttcga
gatttatttgtcggactgactgcctttgatcaatatggcaatgttattcccgccgtagct
cgacatagttttagcgaagatgggaaaacatggctgtttatactagatgataatgccgtt
tggtcaaatggtgaagtagtcagtgcagatgatttcgtggcgagttggcagcgcttatta
gatccacaatctgcatcgccttgggctaattatctggttgatatgcacattgataatgct
aaggaaattcttaccaaagaaatgccactttttgaattaggtgtgagagcattaagctat
aatacattacaaattgagctggaagagcctaattttcaattgccagctatgttggctcat
gtggcactattgccaagttataaagggcaaaagccagaaaacgagctcatttcaaatggc
gcttatgtgttggaaggtattgaaaaacagcgtgttacattgcaagcgagagaaacacat
acggcatttcagcatgtgatctatcaacgagtaggtgaaaagcagagtttgcaaggattt
gatttagttgaaaacccgcccatagattatccgaatgaggcatttagactaccaagactg
tgtagctatttttatgaatttaactttagtgatccagtcattgggcagaaaagtgtcaga
caagcaattcgctcaatgcttgttacacctgaaattggcaaggggcttggtattccgcta
cattcgattttgcctacgacaatgttggaaggacaggatcatctgccttttactggcagt
gcagaatctattttggcgcaaacggagttagattatactaacctcccaccttttacactc
acttttggaaaagatgagttacagcaattggttgcgaatcgttttgtgcgccagttgacc
cagtcagatctctttcgcattcgcttacaagccatggattttgccgaattagaggagctg
caccagcagcagaatttccagattatgccaagggaaatttgtgcagcttatacagaccca
ttggttttcttagcgcaatttcattctcaaagcatggataatcatagtggttatggcaat
gaaaaagtggattcatggctagatgaattacagtcacgccctttgacacaagaacagcgt
gatgaaagaataatgaaaattgttcagcagattaacgaggatgtggcgattttgccactt
ttccaatatcaacgtaaaatagcgctaaatccaagcattatcggcattcataaaaataac
gatagtggtgtggtctatagcaaagatttatctagacaaacaaaggacgagtaa
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