Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_13030
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Entry
F542_13030 CDS
T03017
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btre03009
]
F542_13030
Enzymes [BR:
btre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
F542_13030
Ribosome biogenesis [BR:
btre03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
F542_13030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CON_HrpB
PROCT
Motif
Other DBs
NCBI-ProteinID:
AHG82021
UniProt:
A0A4V7IAL9
LinkDB
All DBs
Position
1405517..1406209
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AA seq
230 aa
AA seq
DB search
MRLDKFIAENTGLTRSQAAKELKAGLITVNGEIVKAGAIKISQQDEIYYDGERLEWVETG
QYFMLNKPQGCVCSHDDGDYPTVFQFFDYPLSSRLHTAGRLDVDTTGLVLLTDDGKWSHR
ITSPKHHCEKTYLVTLADPIEDFYAPKLREGILLRGEKTPTLPAEMEILDDYNLNLTISE
GRYHQVKRMFAALGNKVVALHRWRIGEIILDETLEEGEFRALNKQEIGGF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttattgcagaaaataccggcttaactcgctcacaagcggccaaa
gagcttaaagcaggtttaatcaccgtaaacggtgaaatcgttaaagctggtgcgattaaa
attagccaacaggatgaaatttactacgatggcgagcgcctagaatgggttgaaaccgga
cagtattttatgctgaataagccacaaggctgcgtttgttcccacgatgatggcgattat
ccgactgtcttccaattctttgattaccctctcagcagccgtttgcacaccgcaggacgc
ttagatgtagataccacaggtttagtacttttaactgatgatggtaaatggtcgcaccgg
atcacttccccaaaacaccattgtgaaaaaacctatttagtcactcttgctgatcctatc
gaagatttttatgccccaaaattacgtgagggtattctcttgcgcggcgaaaaaacgcca
acactaccagcagaaatggaaattttagacgactataatctcaatctcacgatttctgaa
ggacgttatcatcaagtaaaacgcatgtttgccgcattaggcaataaagttgtggctcta
caccgctggcggattggtgagattattttagatgaaacactcgaagaaggtgaatttcgt
gcattgaataaacaagaaatcggaggtttttaa
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