Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_14570
Help
Entry
F542_14570 CDS
T03017
Name
(GenBank) Nickel-binding periplasmic protein nikA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
btre
Bibersteinia trehalosi USDA-ARS-USMARC-188
Pathway
btre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
btre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F542_14570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
btre02000
]
F542_14570
Transporters [BR:
btre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F542_14570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHG82173
UniProt:
A0A4V7IAX3
LinkDB
All DBs
Position
1560094..1561662
Genome browser
AA seq
522 aa
AA seq
DB search
MQKILFPFVFSSLLLSACDQQTAQTAIVQAESQTASPTQNNELTLATIVAPWEIGNLEPN
QSGVIFQRMNLAETLVEADQQGNLIPALATEWHSDESGKIWTFTLRENVSFHNGKPLDVQ
AVVNSLNIAKSKPGVLANAFINEIRANNDKLEIELSKAFEPFPSFLTHYSTIILAPESYN
NGGNVVELIGTGAFKPVQIQAPQKLSAQRFDAYWGEKPQLLQANYLASSRSETRSLMAQS
DASSLVFNLDTASVERLKNDPNLQVISGSIARTIQLKMDVAKPFFNDIAIRQALSQAINR
KAIAEQVLKIEDGIADQLLPKGFEEWRVQGEIPAVDIAKIKQNLTAYGYEFDAQGNLTKD
GKPFSFTLRTFSDRPELPIIATILQAQWKQIGVNVNVSVGNFSEIPAGHQDGSLEMALYA
FNYGKTLDPFAIIAQDIANGGSDWGVMNWQNSELDNAVKALETERSPEKAKALKQQISQI
INDELPIIPVVYYQQNVVAHKGVQNITLDPFERRFFLEKLAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattctattcccctttgtattttctagcctacttttaagcgcttgcgatcaa
caaacggcacaaactgccatcgtgcaagcagaatcacaaaccgcttcaccaacacaaaat
aatgagcttacacttgcaactattgtcgccccttgggaaatcggcaaccttgagccgaac
cagtcgggcgtcatttttcagcgtatgaacttagcggaaacattggtagaggcggatcaa
caaggtaaccttattccagcgcttgccaccgaatggcacagcgatgagtcaggcaaaatc
tggacatttaccttgcgtgaaaatgtgtcattccacaatggcaaaccgcttgatgtgcaa
gcggtggtaaatagcctaaacattgcaaaatctaaacccggtgtgctagcgaatgctttc
atcaacgaaattcgtgccaacaatgacaagctagaaattgagctaagcaaagccttcgag
ccatttccatcatttttaacccactactctacgattattcttgccccagaaagctataac
aatggaggcaatgtcgttgaacttatcggcacaggtgcatttaaacccgtgcaaattcaa
gcaccacaaaaactctctgctcaacgttttgatgcctattggggagaaaaaccacagtta
ttacaagccaactatttagccagcagccgtagtgaaactcgttcactgatggcacaaagc
gatgcttcatcattagtgtttaatcttgatacggcaagtgtggaacgtttaaaaaacgat
ccgaatctgcaagtcattagtggctctattgcgcgtaccattcaattaaaaatggacgtg
gcaaagcccttttttaacgatattgcgattcgccaagccctatcacaagcgattaaccgt
aaagcgattgccgagcaagtgttaaaaattgaagatggcattgccgatcagcttctgccg
aaaggctttgaggaatggcgagttcagggcgaaatcccagcagtagatattgcaaaaatt
aagcaaaatctcaccgcttacgggtatgaatttgatgcacaaggcaatctcaccaaagat
ggcaagccgtttagctttaccctacgtaccttttctgaccgcccagaactgccgattatc
gctaccattttgcaagcacaatggaaacaaattggggtgaatgtgaatgtttccgttggg
aatttcagcgaaatccccgcaggccatcaagatggtagcctagaaatggcactctatgcc
tttaactacggtaaaaccttagatccctttgccatcattgcccaagatattgccaatggc
ggtagcgattggggcgtaatgaactggcaaaatagtgagttggataacgcagtaaaagca
ttagaaactgaacgcagtcctgaaaaagccaaagcgttaaaacagcaaatcagccaaatt
atcaatgatgaattgccgattattcctgtggtctattatcagcaaaatgtggtggcacat
aaaggtgtacaaaacatcacgcttgatccgtttgaaagacgtttctttttagaaaaattg
gcgaaatag
DBGET
integrated database retrieval system
